Dickeya lacustris: O1Q98_00770
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Entry
O1Q98_00770 CDS
T08984
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
dlc
Dickeya lacustris
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dlc03009
]
O1Q98_00770 (ycaO)
Ribosome biogenesis [BR:
dlc03009
]
Prokaryotic type
ribosomal protein modification factors
O1Q98_00770 (ycaO)
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
WFN55900
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All DBs
Position
complement(175662..177425)
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQQLLDLGFNIEEASWLNPVPNVWSVHIRDRDCALCFTNG
KGATQKAALASALGEYFERLSTNYFFADFYLGKQIAEGEFVHYPDEKWFPIPDDDSLPEG
ILDDRLHAFYDPEQQLVASDLIDLQSGNHTRGICALPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAEAISLPAIPAEVLARYPGVVEAIATLEKE
GFPILAYDASLGGQYPVICVVLFNPENGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDNDEVAEHTNLETHFIDSSGLISWDLFKNDPDYTFVDWNFSGTTEQEFATLM
AIFNQEGKDVYIADYEHLSVYACRILVPGMSDIYPAEDLLLANNSMGVHLRETLLSLPGS
QWEKDEYLALLQQLDDEGLDDFTRVRELLGIATGKDNGWFTLRIGELKSMLALAGGDLEQ
ALSWAEWSLDFNQSVFAPARRNYYRCLQTLLQLALEPERDPAQYYDAFVRMYGQDAVDAA
SAAIAGEECFYGLFAVDDDLKALPAHQSLLAAYEKLQRAKRSHWQKN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacgtttatcccaggcaaagacgccgccctggaagattccatcgcccgtttt
caacaacagctcctcgacctggggttcaacatcgaggaagcctcctggctaaacccggtg
cccaacgtctggtccgtacatattcgtgaccgcgactgcgcgctctgttttaccaatggc
aaaggtgcgacgcaaaaagcggcgctggcttccgcattgggcgagtatttcgaacgtctg
tctaccaactatttctttgccgacttctatctgggtaaacagatcgctgaaggggagttt
gtacactatcccgatgaaaaatggttcccaatccctgatgatgacagcctgcctgagggg
atactggatgaccgcttgcatgcgttttatgatcctgagcagcagttagtcgccagcgat
ttaatcgacttgcaatcaggcaatcacactcgcgggatttgcgcactgccgttcacgcgc
cagtctgatcaacagacggtgtatatcccgatgaacattatcggcaatctgtacgtatca
aacggcatgtctgctggcaacacgcgtaacgaagcgcgtgtacagggattgtccgaagta
tttgagcgttatgtgaaaaaccggattatcgctgaggccatcagcctgcccgctattccg
gctgaagttctggcgcgctatcctggcgtggttgaagcgattgccacgcttgagaaagaa
ggcttccctatcttggcctacgatgcttcgctcggcggccaatatcctgttatttgtgtc
gtgctgttcaacccagaaaatggtacttgctttgcgtcattcggcgcacaccccgacttc
ggcgttgccctggagcgcaccgtgaccgaattactgcaaggccgagggctgaaagatctc
gacgtcttcacgccgccaaccttcgataatgatgaagtggctgaacacaccaatctggaa
acccacttcatcgactccagcggcctgatttcctgggatctgtttaaaaacgatcctgac
tatacctttgttgattggaacttcagcggcaccaccgagcaggagttcgccacacttatg
gccatcttcaatcaagaaggcaaagacgtttatattgccgattacgagcatttgtcagtg
tacgcttgccgtattctggtgccgggtatgtcggatatttatccagcggaagatctgttg
ctggcgaataacagcatgggcgtacatctgcgtgaaaccctgctctcccttcctggcagc
cagtgggaaaaagatgagtatctggccttgttgcagcaactagacgatgaagggctggat
gactttacccgcgttcgcgaattgctgggcatcgcaaccggtaaagacaatggatggttc
acgctgcgtattggcgaactgaaatctatgttggcactggctggcggcgatcttgaacaa
gcgctgagttgggctgagtggtcactggatttcaaccaatccgtctttgcaccggctcgc
cgtaactactaccgttgcctgcaaacactgctgcaactggctctggagcctgaacgtgac
ccggcacaatactatgatgcgtttgttcgcatgtacgggcaggacgctgttgacgcagcc
agcgcggcgattgccggcgaggaatgcttctacggtttgttcgctgttgatgacgatctg
aaagcgctgcctgcacatcagtcactgctggctgcttatgaaaaattgcagcgcgctaaa
cgttcacactggcagaaaaattaa
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