Dickeya lacustris: O1Q98_02475
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Entry
O1Q98_02475 CDS
T08984
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00300
Lysine biosynthesis
dlc00470
D-Amino acid metabolism
dlc01100
Metabolic pathways
dlc01110
Biosynthesis of secondary metabolites
dlc01120
Microbial metabolism in diverse environments
dlc01230
Biosynthesis of amino acids
Module
dlc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O1Q98_02475 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O1Q98_02475 (dapF)
Enzymes [BR:
dlc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
O1Q98_02475 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WFN57503
UniProt:
A0ABY8GC05
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All DBs
Position
542458..543315
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AA seq
285 aa
AA seq
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MIFHRYHGLGNDYLVCHQSVFEKLTPAHIQRICHRHYGIGSDGLLIDMQTDGIPALKIIN
PDGCEAEKSGNGLRIYARYLFDCGRVMHTRFPIQTAGGMVFCLVEKGAHQITVDMGRANF
SPAALPALVEGDEALSLPLTLGEHRFHATLVSMGNPHCVIRVKHLDLELVQHVGRQIETL
AIFPRRTNVQFVEVLNRQAITIGIWERGAGYTLASGSSSCAAASAMYKLGYIEPRVTVHM
PGGQLAIAIDSQFQVQMRGPVQKVADITLDNDCFFDLMPPTRDSA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ctgatatttcatcgctatcatgggttaggtaatgattatctggtctgtcatcaatccgtc
tttgaaaaactaacgcccgctcatattcagcgaatatgtcaccgtcattatggtattggt
tctgatggtttgcttatcgatatgcaaactgatggcatacctgcacttaaaattattaac
cctgacggttgcgaagcggaaaagagtggtaatgggttgaggatttacgcgcgttacctg
tttgattgtggccgggtaatgcatacccgatttccgatacagacggcaggaggaatggtg
ttttgtctggtcgagaaaggcgctcatcagataacggtagacatggggcgagccaatttt
tcacctgctgcactgccagccctcgtcgagggtgatgaagcattgtccctgccattaacg
cttggagaacaccgcttccacgccaccctggtatctatgggcaaccctcactgtgttatc
cgcgtaaaacacctcgacctcgagctggtacagcacgttggcagacaaatcgaaacactg
gcgatattccctcgccgcaccaatgttcaatttgttgaggtactcaaccgccaggcgatt
actatcggtatttgggagcgcggcgcaggatacactctcgcatcaggcagtagcagttgt
gccgctgccagcgccatgtacaaattgggctacattgaacctcgcgtaacggtacatatg
ccgggaggacagcttgccatcgcaatagatagccaatttcaagttcagatgcgtgggccg
gtacagaaggtagcggatattacactggataacgactgcttttttgacctcatgcccccc
acccgcgactcggcctga
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