Dickeya lacustris: O1Q98_03085
Help
Entry
O1Q98_03085 CDS
T08984
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00040
Pentose and glucuronate interconversions
dlc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
O1Q98_03085
Enzymes [BR:
dlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
O1Q98_03085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
WFN56308
LinkDB
All DBs
Position
complement(682680..683846)
Genome browser
AA seq
388 aa
AA seq
DB search
MAKGKKLSFTFHSYQDSVTGTEVVRLTPPDVICHRTYFYQKCFSNDGSKLLFGGAFDGPW
NYYLLDLKTQQATQLTEGTGDNTFGGFLSPDDDALYYVKNVRNLMRVDLNTLEETNIYQV
PDEWVGYGTWVANSDCTKMVGIEIKKEDWQPLTDWKKFQDFYFTNPCCRLIRIDLKTGEA
TTILQEKQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAPGESC
THEFWVPNGSALAYVSYLKGSTNRFICSVDPVTLENRQLTEMPPCSHLMSNYDGSLMVGD
GCNAPVDVKDDGGYKIENDPFLYVFNMKSGKHFQVAQHNTSWAVLEGDRQVTHPHPSFTP
DDKQILFTSDVDGKPALYLAKVPDSVWQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaaaaagctttctttcacgttccattcctaccaggattccgttaccggc
accgaagtcgtgcgccttactcctcctgatgtcatctgccaccgtacctatttctatcag
aaatgtttttctaatgatggtagtaagctattgtttggcggtgcgtttgatggcccatgg
aactattacctgttagatttgaaaactcagcaggcaacgcagttaactgaaggaacaggt
gacaatacgtttggcggcttcctctctcctgatgatgatgcgctttactatgtgaaaaac
gtgcgtaacttaatgcgtgttgatctgaatactctggaagagacgaacatttatcaggta
cctgatgagtgggttggctacggcacatgggttgctaactctgattgcaccaaaatggtt
ggcatcgaaatcaaaaaagaggactggcaaccgctgacggattggaaaaaattccaagac
ttttactttaccaatccttgctgccgcctgattcggattgatctgaaaacaggtgaggcc
acgactattctgcaagaaaaacagtggttggggcacccgatttatcgtcctggtgatgac
aacacggtagcgttctgccatgaaggcccacacgacctggtagatgcgcgtatgtggttc
atcaacgaagatggcacgaacatgcgtaaagtgaaagagcatgcgccgggtgaaagctgt
actcacgaattctgggttccgaatggttccgctctggcttacgtttcctacctaaaaggc
agtaccaatcgtttcatttgtagtgttgaccctgtcacgctggaaaatcgtcagttgacg
gaaatgccgccttgctcacatttgatgagtaactatgacggttcactgatggtcggtgat
gggtgtaatgcaccggtcgatgttaaagacgatggtggatataagattgaaaatgatccg
ttcctgtatgtctttaatatgaaaagcggtaagcacttccaggtcgcccaacacaataca
tcctgggccgtgctggaaggcgatcgtcaggtgacgcatccacatccatcctttacacct
gatgataaacaaattctgtttacatcggatgttgatggtaaacccgccttgtatctggct
aaagtgccggattccgtttggcagtaa
DBGET
integrated database retrieval system
