Dickeya lacustris: O1Q98_03980
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Entry
O1Q98_03980 CDS
T08984
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
dlc
Dickeya lacustris
Pathway
dlc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
O1Q98_03980
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dlc01002
]
O1Q98_03980
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dlc01011
]
O1Q98_03980
Peptidases and inhibitors [BR:
dlc01002
]
Cysteine peptidases
Family C82
O1Q98_03980
Peptidoglycan biosynthesis and degradation proteins [BR:
dlc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
O1Q98_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
WFN56464
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All DBs
Position
complement(880597..881529)
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AA seq
310 aa
AA seq
DB search
MKRILTLMGLFFSAVLAGVQPTYATEYSLPPPGSRLIGENITYTVPNEGHPLETIAAKFK
IGLLGMLEANPGTDPYLPKPGSVLTVPLQMLLPETPREGIVINLAELRLYYFPKGENTVR
VYPIGIGQLGRNTPVMVTHVIERRRNPTWIPTANTRRHYKEQGVILPAMVPGGPENPMGL
FALRLEKSGGVYSIHGTNADFGIGMRVSSGCIRLRPEDIEALFNDVPVGTRVQIINEPIK
VAVEPDGKRYIEVHQPLSRTDKDDPQTMPIALGQKVTAFIRDQQTDASVVQPAIARRSGM
PVLVNVGQVP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtattttgaccttaatgggactcttcttttctgcggtgttggcaggcgttcag
cccacgtatgcaaccgagtattcgctgccgccgccgggcagtcgattgattggcgaaaat
atcacctatacggtgccgaatgaggggcatccgttagaaaccattgccgctaaatttaaa
attggactattggggatgctggaagccaatcccggtaccgatccctacttgcccaaaccg
ggcagcgtgctgaccgttcctttacagatgttattgccagagacgccacgtgaggggatt
gtcattaatctggccgagttacgactgtattatttccctaaaggggagaatacggtgcgg
gtttacccgataggtattggtcaacttggccgcaatacgcccgtcatggtgacgcatgtt
atcgagcggcgccgtaatcctacctggataccaacggcgaatacgcgccgtcactacaaa
gagcagggcgtcatcttaccggcgatggtacccggagggccggagaatccgatggggtta
tttgcactacggctggagaaaagcggcggcgtgtattcgattcatggcacaaatgccgat
tttggtatcggtatgcgcgtcagttccggctgtatccgtctgcgccctgaggacattgaa
gctctgtttaacgacgtgccggtagggactcgtgtgcagataatcaatgagccgattaaa
gtagcggtagaaccggatggaaagcgttatatagaggttcatcagccgctgtcacgcacg
gataaagatgacccgcaaaccatgccgatagcgctgggccaaaaagtaactgcattcatt
cgcgatcagcagaccgatgccagtgtggtgcagccagctatcgcaaggcgctcgggtatg
cccgtattagtgaatgtcgggcaggtgccatga
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