Dickeya lacustris: O1Q98_06415
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Entry
O1Q98_06415 CDS
T08984
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
dlc
Dickeya lacustris
Pathway
dlc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
O1Q98_06415 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlc03400
]
O1Q98_06415 (xseA)
Enzymes [BR:
dlc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
O1Q98_06415 (xseA)
DNA repair and recombination proteins [BR:
dlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
O1Q98_06415 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
WFN56878
UniProt:
A0ABY8GAE1
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All DBs
Position
1444773..1446158
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AA seq
461 aa
AA seq
DB search
MSALPSSAIFTVSRLNQTVKQLLEAEMGQIWLSGEISNLSQPSSGHWYFTLKDERAQVRC
AMFRNSNRRVTFQVQNGLQVLVRATLTLYEPRGDYQLLAESMHPAGDGALQQQFEQLKQR
LSAQGLFDVQHKQPLPKPARQVGVITSASGAALHDILHILKRRDPSLPVIIYPTAVQGHE
APAQIVRAIELANRRNECDVLIVGRGGGSLEDLWSFNNEHVANAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRDRQELFRQLQAQRQRLEMAFDYYLAQRQQRLARLQ
HRLHQQHPQLRLARQQTQLIRMKQRLKDAIQHQLLLQKRQQQRFDQRLMQQSPQPRVHRA
QQHIQQCHYRLQRALEKQINEYKQRFGEACSHLEAVSPLATLARGYSVTTTIDGQVMKKT
AQISPGDKLKTRLHDGWVESQVIEIKKETTKSRSTRRIKNI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcattgccttcatcggctatttttaccgtcagccgcctaaatcagacggtaaaa
cagttactggaagcagaaatgggtcagatctggctttccggtgaaatctccaacctctct
cagccctcttcgggtcactggtactttacgttaaaagatgaacgcgcccaggtgcgttgc
gcgatgtttcgtaacagtaaccggcgtgtcacctttcaggtgcagaatggcttacaagtg
ttggtacgcgccacactcacgctttacgagccgcgtggcgactatcaactcttggctgaa
agtatgcatccagcgggcgacggcgcgctacagcagcagttcgaacagttgaaacaacgc
ttatccgcgcaagggctatttgatgtgcagcacaagcagccgctgccaaaaccggcacgt
caggttggtgtgattacctcagccagcggcgcggcgctgcatgacatactccatattcta
aagcggcgagacccgtcactgccggtaattatttatcctacggcagtgcaaggacatgag
gccccggcacaaatcgttcgggcgatagagctggctaaccggcgtaatgaatgtgatgtg
cttatcgttgggcgcggcggcggctcgctagaggatttatggagcttcaataatgagcac
gttgccaatgccattttcgccagtcgcatcccgattgtcagcgcggtcggtcatgaaacc
gatgtgaccatcgccgattttgtagcagatttacgcgcgccaaccccctctgcggctgca
gaattggtcagtcgcgatcggcaagaactgttcagacagcttcaggcgcagcgccagcgg
ctagagatggctttcgactactatctggcgcaacgtcagcaacgcttggctcgcttacaa
catcggttacatcagcagcatccacaactgcgcctggcgcgccagcaaacgcagcttatc
cgcatgaaacagcggttgaaggatgccattcaacaccagttgttgttacaaaaacggcag
cagcagcgttttgatcaacgcctgatgcaacagtccccacagcctcgcgtacaccgggca
cagcagcatatacagcagtgccattatcgactacaacgcgcgttggaaaaacagattaac
gagtataaacaacgttttggcgaggcctgttcacacctggaggcagtaagccctctggcg
acactggctcgtggttatagtgtcaccaccaccattgatggccaggtgatgaaaaaaacg
gcgcaaatatcgccgggcgataaactaaaaacccgtctgcatgatggttgggtcgaaagc
caggtgattgaaataaaaaaagaaaccaccaagtctcgttcaacgaggcgcataaaaaat
atttag
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