Dickeya lacustris: O1Q98_07420
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Entry
O1Q98_07420 CDS
T08984
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
dlc
Dickeya lacustris
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
O1Q98_07420
Enzymes [BR:
dlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
O1Q98_07420
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GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Rhamnogal_lyase
CarbopepD_reg_2
DUF2249
Motif
Other DBs
NCBI-ProteinID:
WFN57038
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Position
1650040..1651611
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AA seq
523 aa
AA seq
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MKRSLKTWHAPLLAVALAIPLAASSAVTLTLDGMNSTLDNGLLKVRLGADGSAQEIWKGG
NNLIQHLSGAARDPDKNRSFYLDYYSGGVNEFVPERISIMSQTPDQVHLAYIDDQNGKLR
LEYHFIMRSNVSGIYSYVVAANTGSTPVTVSELRNVYRFDASRLNQLFNGVRRGTPLLYR
ELEAQPKVQDETWQLPDGNIYSKYDFAGYQRATRYWGVLGNGYGAWLVPASDEYYSGDAL
KQELLVHQDAIILNYLTGSHFGTPDMVAQPGFEKLYGPWLLYINQGGDREVLADASRRAE
HERARWPYTWMDDARYPQQRATVSGQVRTQAPHALVALNSSGEDADIQTHGYLYHARTNR
DGQFTLHDVPPGEYQLSVYADGGSEIGLLAQQTVHIDAGRVTLAPIATRPAEALVWAIGQ
ADRKAGEFRFGDKLRQYHWQTDVPANLSYEIGKSRERHDWYYAQTQPGSWRILFTTHQPQ
KAYTLHIGLAGASNSGMSTPVTTPQLAVKLNDQWLTTLKYEQR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatcgttgaaaacgtggcacgctccgctactggcggtcgcgctggcgataccg
ctcgccgcctccagtgccgtcaccctcacgctggatggcatgaatagcacgctggataac
ggcctgctcaaagtgcgtctcggcgcagacggcagcgctcaggaaatctggaaaggcggc
aataatctgattcagcacctctccggtgcagcgcgcgacccggataaaaaccgcagcttt
tatctcgattattactccggcggcgtcaatgaattcgtccctgagcgcatcagtatcatg
agtcaaacgcccgatcaggttcatctggcgtatatcgatgaccaaaacggcaaactgcgg
ctggaatatcacttcatcatgcgcagcaatgtcagcggcatctacagctatgtggtcgcc
gctaacaccggctcaacccccgtcaccgtcagtgagttgcgcaatgtttaccgcttcgat
gccagccgcctgaaccaactgtttaacggcgtgcgacgcggtacgccgctgctttaccgc
gagcttgaagcccaaccgaaggtgcaagatgaaacctggcaattacccgacggcaacatc
tacagcaaatacgacttcgccggttatcagcgagcaacccgttactggggcgtgctcggc
aatggctatggtgcctggttagtgcccgcgagcgacgaatactactctggcgatgccctc
aaacaagagctactggttcatcaagacgccattatcctcaactacctcaccggctcgcac
ttcggcaccccagatatggtggcacaacccggttttgaaaaactctacggcccgtggctg
ttatacatcaaccaaggcggcgatcgtgaagtgctggctgatgccagccgccgggctgaa
catgaacgcgcccgctggccatacacatggatggatgacgcacgctacccgcaacaacgc
gcgacggtcagcggtcaggtgcgcacccaggcaccgcatgctctggtggcgttaaacagc
agcggtgaagatgccgatatacagacccacggttatctgtatcatgcgcgcaccaaccgt
gatggtcagtttacgctgcatgatgtgccgcccggtgaatatcagttatccgtctatgcc
gacggcggcagcgagatagggttactggcacaacaaacggtgcatattgacgcagggcgc
gtcacccttgcgcctatcgcaacccgcccggctgaagcgctggtgtgggccatcggccag
gcagaccgaaaagccggtgagttccgttttggcgataaactgcgccagtatcactggcaa
accgatgttcccgccaacctgagctatgaaatcggcaaaagccgtgagcgccatgactgg
tactatgcccagacccagccgggaagctggcgcatcttgtttaccacccaccaaccgcaa
aaagcctacaccctacacatcggtttagcgggtgccagtaacagcggcatgagcacgcca
gtgacgacgccacagttagccgtcaaactcaatgaccaatggctaaccacactcaagtat
gaacaacgataa
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