Dickeya lacustris: O1Q98_07800
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Entry
O1Q98_07800 CDS
T08984
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dlc
Dickeya lacustris
Pathway
dlc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O1Q98_07800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dlc02000
]
O1Q98_07800
Transporters [BR:
dlc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
O1Q98_07800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
XylR_N
Motif
Other DBs
NCBI-ProteinID:
WFN57107
LinkDB
All DBs
Position
complement(1727992..1729602)
Genome browser
AA seq
536 aa
AA seq
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MKARAILRTLLLSTLCMAATPAVLSAKTPDDQLIVGMNMNNMLSLDPAAMTGNEVVGVVV
NLYDSLVELDPDNLSHVLPALAKSWSVSDDGNVITFNLVDNAKFHSGNPVTAEDFVWSMS
RLLHLNMAQATTWKSYGFTPDNVAKMIRAKDAHTVEIELPKPNDAKLIIYSLATLGSGSV
LDRKTVLQHEKNGDWGNGWLTTNEAGSGPFKLDVWQAKDVLRISRANGYWQGDAKMKRVI
FRHMTESQALRLMIEKGDIDVATGMSVPDINALKQDKEVVVKEVTKGTLYYVSMSLKNTY
FANPKVREAVRYLIDYDGINNTVMTGYGFYHQRPIQKGMDATLPDPGYKLDVARAKTLLA
QAGYPNGFETTLRVLSDQPFLNLATSVQSTLAQAGIKVQILSGTGNQVYGAMRDRKFDML
VGRGGGGVDPHPHSSLRSVVYNPDNSDEAKLTNFQGWRTSFYDKQLNEVIDQALLEKDPQ
KQKQMYIDVQNRYEALYPAIIPVSQMIDSVVLRKDVVKYVPHPSSTTHLRDVYKQR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcgagcaatacttcgtaccctgttactgagcacgctgtgtatggccgccaca
ccggcggttctgtctgctaaaacgcctgacgatcaattgattgtcggcatgaatatgaac
aacatgctgtcgctcgaccccgccgcgatgaccggcaatgaagtggtcggcgtcgtggtg
aatctctacgactcgctggtcgagctagaccccgacaacctgagccacgtgttgcccgcg
ctggcgaaaagctggagcgtgagcgacgacggcaacgtcatcactttcaatctggtggat
aacgcgaaattccattccggcaacccggtgacggctgaggattttgtctggtcgatgagc
cggttgctgcacctgaatatggcgcaggcgaccacctggaaatcctacggctttacgccg
gataacgtcgcgaagatgatccgcgccaaagatgcccatacggtcgagatagaactgccc
aaacccaacgatgccaaactgatcatttattcactggcgacgctcggcagcggctcggta
ttggatcgcaaaaccgtgctgcaacacgagaaaaacggcgactggggcaatggctggctg
accaccaatgaagccggttccggccccttcaagctggatgtatggcaggcaaaagatgtg
ctgcgtatcagccgcgccaacggctactggcagggcgacgccaaaatgaagcgcgtcatt
ttccggcatatgaccgaatcgcaggcgctgcggttgatgatagagaaaggcgacatcgat
gtggcgaccggcatgtcggtgccggatatcaacgcgctgaagcaggataaagaggtcgtg
gtgaaagaagtgaccaaaggcacgttgtattacgtgtcgatgagcctgaagaacacgtat
ttcgccaacccgaaagtgcgcgaagcggtacgctatctgatcgactacgatggcatcaac
aacaccgtgatgaccggctatggtttctaccatcagcgcccgatccaaaaagggatggac
gccacgctgcccgatccggggtacaagctggacgtggcgcgggcgaagaccttgctggcg
caagcgggctaccccaacggctttgagacgacgctgcgcgtgttgtccgatcaacctttc
ctcaatcttgccacttcagtgcaatcgacactggcgcaagctggcatcaaagttcagatc
ctctccggcaccggtaatcaggtctatggtgcgatgcgcgatcgcaagttcgacatgctg
gtcgggcgcggcggcggcggggttgaccctcatccgcattccagcttgcgctccgtggtg
tacaaccccgacaacagcgatgaagccaagttgaccaattttcagggctggcgcacctcg
ttttatgacaagcagctgaacgaggttatcgatcaggcgttgctggaaaaggacccgcaa
aagcagaagcagatgtatatcgacgttcagaaccgttatgaggcgttgtatccggccatt
attccggtttctcagatgatcgactcggtggtgttgcgcaaggacgtggtgaagtatgtg
ccgcatccgtcttccaccacccatctgcgcgacgtgtacaagcaacgctaa
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