Dickeya lacustris: O1Q98_08030
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Entry
O1Q98_08030 CDS
T08984
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
dlc
Dickeya lacustris
Pathway
dlc00010
Glycolysis / Gluconeogenesis
dlc00020
Citrate cycle (TCA cycle)
dlc00620
Pyruvate metabolism
dlc00650
Butanoate metabolism
dlc01100
Metabolic pathways
dlc01110
Biosynthesis of secondary metabolites
dlc01120
Microbial metabolism in diverse environments
dlc01200
Carbon metabolism
dlc01210
2-Oxocarboxylic acid metabolism
Module
dlc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
O1Q98_08030 (nifJ)
00020 Citrate cycle (TCA cycle)
O1Q98_08030 (nifJ)
00620 Pyruvate metabolism
O1Q98_08030 (nifJ)
00650 Butanoate metabolism
O1Q98_08030 (nifJ)
Enzymes [BR:
dlc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
O1Q98_08030 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_16
Fer4_21
Fer4
Fer4_10
TPP_enzyme_C
Fer4_9
Fer4_6
Fer4_2
Fer4_8
Fer4_17
Fer4_4
Fer4_18
Transketolase_C
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
WFN57150
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All DBs
Position
1776587..1780120
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AA seq
1177 aa
AA seq
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MITTDGNNAVASVAFRTSEVIAIYPITPSSTMAEQAAAWSSDERKNIWGDTPRVIEMQSE
AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGQLTPLVLHVAARTVATHALSIF
CDHSDVMAVRQTGCAMLCASSVQEAQDFALIAQMASLNSRLPFIHFFDGFRTSHEINKIA
PLSDDVLRTLLPQAAIDAYRERALTPDRPVIRGTASNPDTFFQAREATNPWYDAAVGHVV
QAMDDFAGVTGRQYQPFEYYGHPQATRVVVIMGSGSGTCEEVVDALLARGEKVGVVKVRL
YRPFSAQHLLGCIPQSAQRIAVLDRTKEPGALAEPLYLDVMTALAEAFSRGERSLMPQVI
GGRYGLSSKEFTPQCVEAVYNELALTNPRARFTVGIYDDVTHLSLPLSGQPMPTQMSLQA
LFYGLGSDGTVSAAKNSIKIVGTATPLFVQGYFVYDSKKAGSLTVSHMRVGPHPIHSAYL
IEQADFVACHQWQFIEKYSMVDRLKPGGIFLVNAPYSASELWARLPQEVQAGLNQRQARV
YCINAAKIARECQLGARINTVMQMAFFHLTQILPGENARDKLRDAISSSYGNKGQELVER
NWQALDATLASLDAVALEPVNPASPHRPPVVSNAAPDFVKTVTAAMLAGLGDSLPVSALP
PDGTWPTGTTQWEKRNIAERIPLWKAELCTQCNHCVAACPHSAIRAKVVPATAMAEAPAS
LASLDVKARDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPDIKAINMEPRLEHVATE
KTHYDFFLTLPEIDRSQIERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRLL
IANATGCSSIYGGNLPTTPWTTDANGRGPAWANSLFEDNAEFGLGFRLSVDSHRQRALRL
LEQLSDQLPPELVEGLRDSRVTVDARREQIAQMRQLLQTHTSDAARQLSADADHLVEKSV
WLIGGDGWAYDIGYGGLDHVMSLSENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGEHG
KRKARKDLGINVMMYGHVYVAQISLGAQLNQTVKAIQEAEAWPGPSLIIAYSPCEEHGYD
LAHSHEQMRQLTTTGFWPLYRFDPRRAEEGKPALVTDSRAPSASLSDTLLNEQRFRRLNT
LQPDAAAQLYAEAEADLRRRYDFLSMLAGKAEKNTPE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaccgatggtaataacgcggtcgcttccgttgcgtttcgcaccagcgaagtc
atcgccatctaccccattacgcccagttcgaccatggcggaacaggccgccgcctggtcg
agtgacgaacgcaaaaatatctggggagacacacctcgggtgattgagatgcaatcggaa
gccggtgccatcgccacggtacacggcgcgctgcaaaccggtgccctgtccacctcgttt
acctcatcgcaggggttactgctgatgatcccgacgctgtacaaactggccggccaactg
acgccgttggtattgcatgtcgccgcacgcaccgtcgcaacgcatgcattgtcgattttt
tgtgatcattccgatgtgatggcggtacgccaaaccgggtgcgccatgctctgcgccagc
agtgtgcaagaagcgcaagacttcgcgctgattgcgcaaatggccagtctgaatagtcgc
ttgccgtttatccatttcttcgatggttttcgcacctcgcatgaaatcaataaaattgcg
cccctgagcgatgatgtgttgcgcacgttgctgccacaggctgcaattgatgcctaccgt
gagcgagcactcacacccgatcgcccggttatccggggaacggcgtccaaccccgatacg
ttcttccaggcacgggaagcaaccaacccgtggtatgacgccgccgttggccatgtcgta
caggcgatggatgatttcgctggcgtcaccggccgccagtatcagccttttgagtattac
ggccacccacaagccacacgcgtggtggttatcatgggttcaggcagcggcacctgtgaa
gaagtggtcgatgcgctgctggcgcgcggcgaaaaggtcggggtggtgaaagtgcgcctt
tatcgccccttttcggcacaacacctgctgggctgcatcccgcagagcgcgcagcgcatt
gccgtgctcgacagaaccaaagagccgggtgcgctggccgaaccgttgtatctggatgtg
atgacggcactggcagaagccttctctcgcggtgagcgctcgctgatgccgcaagtcatc
ggtggccgttacgggctctcctccaaagagttcacgccgcagtgcgtagaagcggtatat
aacgagttggcgcttactaaccccagagcgcgttttaccgtcggtatttatgacgatgtg
acccatttatcactgccgctgtccgggcaaccgatgccgacgcagatgtcgctgcaagcg
ctgttttacggccttggcagcgacggcacggtttctgccgccaaaaactcgattaaaatc
gtcggcaccgctacgccgttgttcgttcaggggtatttcgtctacgactccaagaaagcc
ggtagcctgacggtctcacacatgcgcgtcggcccgcacccgattcactcggcctatctc
attgaacaggcggattttgtcgcctgccaccaatggcagtttatcgagaagtacagcatg
gtcgatcgcctgaaaccgggcggaatcttcctcgtcaatgccccgtatagcgcaagcgaa
ctgtgggcgcggttgccacaagaggttcaggccggtttaaaccagcggcaggcgcgggtg
tactgcattaatgcggccaaaatcgcgcgggagtgtcagttaggcgcacgcatcaacacc
gtgatgcagatggccttcttccacctgacgcaaattctgccgggcgagaatgcacgcgat
aaactgcgcgacgccatcagcagcagttatggcaacaaaggccaggaactggtcgagcgg
aactggcaggcgctggatgccacgctcgcttcactcgacgccgtcgcgctggaaccggtc
aatccggccagcccacaccgcccaccggtcgtgtccaatgccgcccctgattttgtaaaa
accgtgaccgccgccatgctagccgggctgggtgacagcctgccggtgtcggccctgccg
ccggacggcacctggcctaccggcaccacccagtgggagaaacgcaacatcgcagagcgt
atcccgctgtggaaagctgaactctgtacgcaatgcaaccactgcgttgccgcctgcccg
cattcggctatccgcgcgaaagtcgttccggccacggcaatggcggaggctccggcgtca
ctggcctcgctggacgtgaaggcgcgcgatatgcgcggccaaaaatatgtactgcaagtg
gcccctgaagattgcaccggttgtaacctgtgtgtcgaagtctgcccggccaaagatcgc
caaaacccggacattaaagccatcaacatggagccgcgtctggagcatgtcgcgacagag
aaaacgcactacgatttcttcctgacgctgccggaaattgaccgcagccagattgaacgc
atcgatattcgtacctcgcagctgattaccccgctgtttgaatactctggtgcctgctca
ggctgtggcgaaaccccctatatcaagctgctgacacagctctatggcgatcgcctgctg
attgccaatgccaccggctgctcgtcgatttacggcggcaacctgcccaccacaccgtgg
acaaccgacgccaatggccggggcccggcctgggctaactcgctgtttgaagacaatgcc
gaattcggcctgggctttcgcctgagcgtcgatagccaccgccagcgcgcgctgcgcctg
ctggagcagctgagtgaccagctcccgccagaattggtcgagggcctgcgcgacagccgt
gtcaccgttgatgcacgccgcgagcagattgcccagatgcgccagttactgcaaacgcac
accagcgatgccgcgcgccagttgtcagccgatgccgaccacttggtcgaaaaatccgtt
tggctgattggcggtgacggctgggcttacgatattggctacggcggccttgaccacgtg
atgagcctgtcggagaacgttaacgtactggtgctggatacccagtgctactccaacacc
ggcggccagcaatccaaagcgacgccgcttggcgccgtcaccaaattcggcgaacacggc
aagcgcaaagcgcgtaaagacctgggcatcaatgtgatgatgtacggccatgtctatgtg
gcgcaaatctcactgggcgctcagttaaaccagacggttaaagccattcaggaagccgaa
gcctggccgggcccgtcgttgattatcgcctacagcccgtgtgaggagcacggttatgat
ttggcgcacagccacgagcaaatgcgccagctcaccaccaccggattctggccgctctac
cgattcgacccgagacgcgccgaggaagggaaaccggcgctggtgacagactcacgcgca
ccgtcggccagcctgagcgatacgctgctcaacgagcaacgctttcgccgcctgaatacc
ctacagccggatgccgccgcccagctctatgccgaagccgaagctgacctacgccgtcgc
tacgattttctgagcatgctggcaggaaaagcggagaaaaatacgccggaataa
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