Dickeya lacustris: O1Q98_08185
Help
Entry
O1Q98_08185 CDS
T08984
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00521
Streptomycin biosynthesis
dlc00523
Polyketide sugar unit biosynthesis
dlc00525
Acarbose and validamycin biosynthesis
dlc00541
Biosynthesis of various nucleotide sugars
dlc01100
Metabolic pathways
dlc01110
Biosynthesis of secondary metabolites
dlc01250
Biosynthesis of nucleotide sugars
Module
dlc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
dlc_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
O1Q98_08185 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
O1Q98_08185 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
O1Q98_08185 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
O1Q98_08185 (rfbB)
00525 Acarbose and validamycin biosynthesis
O1Q98_08185 (rfbB)
Enzymes [BR:
dlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
O1Q98_08185 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WFN57593
UniProt:
A0ABY8GC98
LinkDB
All DBs
Position
complement(1818358..1819425)
Genome browser
AA seq
355 aa
AA seq
DB search
MKILVTGGAGFIGSAVVRHIIKNTADSVVNVDKLTYAGNLESLADVSGHERYVFKHVDIC
NAADLKEVFDSCQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSHLEP
SRKSAFRFHHISTDEVYGDLEGTDSLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLP
TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT
EGVVGETYNIGGHNEKANIEVVKTICSLLDELVPQKPAGVGAYQDLITYVKDRPGHDVRY
AIDAGKIGRELGWKPQETFESGIRKTVEWYLNNRSWWERVLDGSYSRERLGSVNK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattagtaacaggtggtgccggatttatcggttctgcagtggttcgtcatatt
atcaagaacacagcggactccgttgttaacgtagataaactcacctatgctggcaatctt
gaatcgttggctgacgttagtggacatgaacgttacgttttcaagcatgtcgatatttgt
aatgccgctgacttaaaagaggtttttgatagctgtcagccagacgcggtgatgcatttg
gccgcagagtcccatgttgaccgctctattgatggccctgctgcttttattgaaactaat
attgttggaacatacacattactggaagcggctagggcttactggagtcatctggagccg
agcaggaaatcagctttccgttttcaccatatttcgacagatgaggtctatggcgattta
gagggaacagattctctatttacagaaacgacaccctatgcccctagtagcccgtattca
gcctctaaagcatccagcgatcatcttgtccgtgcctggttacgtacttatggtttgccg
acaattgtgacaaattgttctaacaactatggcccctatcattttcccgaaaaattaatt
ccactgatgattttaaatgccttagaaggtaaggcgttgccggtttatggtgatgggatg
cagattcgtgattggttgtttgttgaagaccatgcacgagcgctttataaagtcgttact
gaaggtgttgttggcgagacttacaacattggcgggcacaacgaaaaagccaatattgag
gttgttaaaaccatttgcagtctgcttgatgaattagtaccacaaaagccagctggtgtt
ggagcatatcaggatttgattacctatgtaaaagaccgtccagggcatgatgtacgttat
gctattgatgcaggaaaaatcggtcgggagctcggatggaaacctcaggaaacctttgaa
agtggtattcgaaaaacggttgaatggtatctaaataaccgttcatggtgggagcgagta
ttagatggttcatatagtagagaacgtttagggagcgtgaataaataa
DBGET
integrated database retrieval system