Dickeya lacustris: O1Q98_08200
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Entry
O1Q98_08200 CDS
T08984
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
O1Q98_08200 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dlc01007
]
O1Q98_08200 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlc03016
]
O1Q98_08200 (lysS)
Enzymes [BR:
dlc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
O1Q98_08200 (lysS)
Amino acid related enzymes [BR:
dlc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
O1Q98_08200 (lysS)
Transfer RNA biogenesis [BR:
dlc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
O1Q98_08200 (lysS)
Prokaryotic type
Other AARSs
O1Q98_08200 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WFN57176
LinkDB
All DBs
Position
complement(1821448..1822965)
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AA seq
505 aa
AA seq
DB search
MSEPQNQGAEQALDLNNELKTRREKLAALRDNGIAFPNDFRRDSTADQLHASFDEKDNEE
LEALGLEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGIYNEQFKKWDLGD
ILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDES
RHTFRVRSQILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQNILGNTEVTYGDQVFDFGKPFEKLTMREAIKKYRPETEMAELDQFDSAKAIAETIGI
KVEKSWGLGRIVTEIFEEVAEVNLIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPQK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacaaaaccagggtgccgagcaggcgctggatctgaacaacgaactgaaa
acccgccgcgagaagctggcggcgttgcgtgataacggcatcgcttttccgaacgatttc
cgtcgtgacagcaccgccgatcaactgcatgccagcttcgatgaaaaagacaacgaagag
ctggaagcgctgggcctggaagtgacggtggcagggcgcatgatgacccgccgtatcatg
ggcaaagcgtcattcgtgactttgcaggacgttggcggccgcattcagctgtacgtcgcg
cgtgatgacctgccggaaggcatctacaacgagcagttcaaaaaatgggatttgggcgac
atccttggcgcacgcggcaagctgtttaaaaccaagaccggtgagctttccatccactgt
accgaactgcgtttgctgaccaaggcattacgcccactgccggataaattccacggcctg
gcggatcaggaaacccgttaccgccagcgttaccttgacctgattgccaacgacgaatcc
cgccacactttccgtgtgcgctcgcagattctggccggtattcgccagttcatggttggc
cgcgattttatggaagtggaaacgccgatgatgcaagtcatccccggcggtgcgtctgct
cgcccgttcattacccatcacaacgcgctggatatcgacatgtatctgcgtattgcgccg
gagctgtacctgaagcgtctggtggtcggtggttttgagcgcgtattcgaaattaaccgt
aacttccgtaatgaaggggtgtcgccgcgccataatcctgagttcaccatgatggaactc
tacatggcgtacgcggattacaaagacctgattgaactgacggagtcactgttccgcacg
ctggcgcaaaatattctcggcaacaccgaagtgacttatggcgaccaggtgttcgacttc
ggcaagccgtttgaaaagctgaccatgcgcgaagctatcaaaaaataccgcccggaaact
gaaatggccgagctggatcaattcgatagtgcgaaagccatcgctgaaaccatcggtatt
aaggtggagaagagctgggggcttggccgtattgtgactgaaatctttgaagaagttgca
gaagttaatctgatccagccgacgttcatcactgaatatccggctgaagtgtcgccgctg
gcgcgccgcaacgaccagaacccggaaattactgaccgcttcgagttcttcatcggcgga
cgtgaaatcggtaacggtttctccgagctgaacgacgctgaagatcaggcgcaacgcttc
caggatcaggtggcggcgaaagatgccggtgacgacgaagcgatgttctacgacgaagat
tacgttacggcgctggaacatggcttgccgccgacggcgggccttggtatcggcatcgac
cgtatggtgatgctgtttaccaacagccatactattcgtgatgtcattctgttcccggcg
atgcgtccgcagaagtaa
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