Dickeya lacustris: O1Q98_08345
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Entry
O1Q98_08345 CDS
T08984
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dlc
Dickeya lacustris
Pathway
dlc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O1Q98_08345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlc03021
]
O1Q98_08345
Transcription machinery [BR:
dlc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O1Q98_08345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
PhyR_sigma-like
GerE
HTH_VMAP-M9
DUF7134
Sigma70_ECF
HTH_28
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WFN57196
UniProt:
A0ABY8GB28
LinkDB
All DBs
Position
1848923..1849462
Genome browser
AA seq
179 aa
AA seq
DB search
MSAVNTASPTHFQQLYQQHHGWLQGLLRHRLGNLCDAADLAHDIFVQLLTRPRHFDSHAG
ARAYLSVMAQGMCVDLWRRRTLEQAWLASVSACQAQVALSAEQHTIILQTLYQVDAMLRQ
LPEKVRAAFILSQIEGQTYAQIAATLGVSERMVKKYMAQAMLHCLLLETEQIDTESISS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgtcaacaccgcaagcccaacgcattttcagcaactctatcagcagcaccac
ggctggttacagggcttgttgcgccatcggctcggcaacctgtgcgacgccgccgatctc
gcgcatgacatttttgtacaactactcacgcgcccgcgtcatttcgacagccacgccggg
gcccgcgcttacctgagcgtgatggcgcaaggcatgtgtgtcgatttatggcgacggcgc
acactggagcaagcctggttagcctcagtgagcgcgtgtcaggcacaggtagccctgagc
gcagagcaacacaccatcattctgcaaaccctgtatcaggtcgatgccatgctgcgccag
ttgccggaaaaagtgcgcgcggcatttatcctgtcgcagatagaaggccaaacctacgcc
cagatagccgctacgcttggcgttagcgaaagaatggtaaaaaaatacatggcgcaggca
atgctgcactgtctattgctagaaacagaacagattgacaccgagagcatatcgtcatga
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integrated database retrieval system
