Dickeya lacustris: O1Q98_08435
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Entry
O1Q98_08435 CDS
T08984
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dlc
Dickeya lacustris
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlc03016
]
O1Q98_08435 (truB)
Enzymes [BR:
dlc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
O1Q98_08435 (truB)
Transfer RNA biogenesis [BR:
dlc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
O1Q98_08435 (truB)
Prokaryotic type
O1Q98_08435 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WFN57212
UniProt:
A0ABY8GB51
LinkDB
All DBs
Position
complement(1871096..1872052)
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AA seq
318 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPVCLG
EATKFSQYLLDADKRYRVIARLGQRTDTSDADGNLITQRPVTFDNDALMLALDSFRGHTQ
QVPSMYSALKYEGRPLYEYARQGMVVPRDARDITVYELLFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPTARMVTLAQLQALHEQAVTQERPVGELLDDL
LLPMDTAVQAFAEVNLSSVVAGYLKLGQAVRAPGAPVEGMVRITEGESRKFIGMGEIDDE
GRVAPRRLVVENFSQVVA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcctcgtcgtcgtggccgggatattcacggcgtactgttgttagataaaccg
cagggtgcatcatcaaatgatgtgctgcaaaaggtgaaacgcctgtttaatgccaacaaa
gccgggcataccggggcgcttgacccactggcaaccggtatgctgccggtgtgtctcggt
gaagcgacaaaattttcccaatacttgttggatgcagataaacgttatcgcgtcattgcc
cgtctcggtcaacggacggatacctcagacgcggatggtaatctgataacccagcgtcca
gtcacatttgataacgatgcgctgatgctggcgttagacagttttcgtggccatacccag
caagtgccttccatgtattcggctttgaagtacgaaggccgcccgctgtatgagtatgcg
cgtcaaggtatggttgtaccccgcgatgcgcgtgatattacggtatatgagctactgttc
attcgctgggaaggggatgagctggagcttgagattcactgctcaaaaggcacttacatt
cgtaccattattgacgatctgggcgaaaagctgggatgcggcgcgcatgttatctatttg
cgtcgtttgcaggttgcaacatacccgacggcacggatggtgacgctggcacagttgcaa
gcgctgcacgagcaggccgtgactcaggaacgtcccgttggcgaactgctggatgactta
ctgttgccgatggataccgcagtacaggcatttgccgaggttaacttatcttctgttgtc
gcaggttatttaaaactcggtcaggcggtgcgtgcgccgggggcgcctgtagaaggcatg
gtgcgtattaccgaaggtgaatcccgcaagtttatcggtatgggcgaaattgatgatgaa
ggtcgcgtagcgccccgtcggttagtcgtcgagaatttctcccaggtcgttgcctga
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