Dickeya lacustris: O1Q98_10240
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Entry
O1Q98_10240 CDS
T08984
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00730
Thiamine metabolism
dlc01100
Metabolic pathways
dlc01240
Biosynthesis of cofactors
Module
dlc_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
O1Q98_10240 (thiC)
Enzymes [BR:
dlc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
O1Q98_10240 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WFN54099
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Position
2254309..2256294
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AA seq
661 aa
AA seq
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MSTEPTSPTEPTSSTASRVLTEQTAPGRREQRAAAQQFIASLRGSTFPNSQRIYLTGSRP
DIRVPMREIRLSPTLTGGSRDNPHYEPNEAVPVYDTAGPYGDPAITPDVHRGLAALRADW
IAERGDTEPLAHASSGFTQQRLADIGLDHLRFDPLTKPLRAKTGQCVTQLHYARRGIITP
EMEFIAIRENMGRERIRSAVLRQQHPGHHFGARLPENITPEFVREEVAAGRAIIPANINH
PESEPMIIGRNFLVKVNANIGNSSVSSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETR
EWILRNSPVPIGTVPIYQALEKVNGIAENLTWELFRDTLLEQAEQGVDYFTIHAGVLLRY
VPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVALSLGDGLRPGS
IQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIQRNMTEELEHCHEAPFY
TLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKHDVKQGLIAYKIA
AHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPETARAYHDETLPQESGKVAHF
CSMCGPKFCSMKITQEVRDYAARQQTQSIDVGMANMSAEFRARGSELYHSAAATSLPQEE
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaaccaacgtcacctacagaaccaacttcgtctacagcatcgcgtgttctc
acagaacaaaccgcacccggtcgccgagaacagcgcgccgccgcccagcagtttatcgcc
tcgctgcgcggctcaacctttcctaattcgcaacgcatttatctgaccggctcgcgcccg
gacattcgcgtaccgatgcgggagatccgcttaagtccgacgttgacaggcggcagccgt
gataacccgcactatgagcccaacgaagccgtgccggtgtatgacaccgccgggccgtat
ggcgacccggccatcacccccgatgtccaccgtgggctggcggcattgcgcgccgactgg
attgccgaacgcggcgacaccgagcccctggcgcacgccagctccggtttcacccaacag
cggctggcggatatcggccttgatcatctgcgttttgaccctctgaccaaaccgctgcgc
gccaaaaccggccagtgcgtcacccaactgcactacgcgcggcgcggcattatcacgccg
gaaatggaatttatcgccatccgtgaaaacatggggcgcgagcgtattcgcagcgccgtg
ctgcgccagcagcatcccggccaccactttggcgctcgcttgccagagaacatcacgcca
gagttcgtgcgcgaggaagtggccgccgggcgcgcgattattccggctaacatcaatcac
ccggaatcggagccgatgattattggccgcaattttctggtcaaagtgaacgccaatatc
ggtaactcttcggtcagttcctcgattgaggaagaagtggaaaaactggtctgggccacg
cgctggggcgcagacacagtgatggatctctcgaccgggcgttatatccatgaaacccgc
gaatggattttgcgcaacagcccggtgccgatcggcacagtgccgatttatcaggcgctg
gaaaaggtcaatggtattgcggaaaacctcacctgggaattgttccgcgacaccttactc
gagcaggccgaacaaggggtggattacttcaccattcacgccggtgtactgctgcgttac
gtcccgatgaccgccaaacgcctgaccggtattgtctcgcgcggcggttccatcatggcg
aaatggtgcctgtcgcaccatcaggagaacttcctctaccagcatttccgcgaaatttgc
gaaatctgcgccgcctatgacgtcgcgctgtcgctgggcgatggcctgcgccccggctcg
attcaggatgccaacgacgaggcgcagtttgccgagctgcacacgctgggcgagttaacc
aaaatcgcctgggaatacgacgtgcaggtgatgatagaaggccccggtcatgtgccgatg
cagatgatccaacgcaatatgaccgaagagctggaacactgccacgaagcgccgttctac
acgctgggtccactcaccaccgacatcgcccccggctacgaccatttcacctccggcatt
ggcgcggcgatgataggctggttcggctgcgccatgctgtgctacgtcacgccgaaagaa
catttggggctgccgaacaaacacgatgtcaaacaagggctgatcgcttacaagatcgcc
gctcacgccgctgatttagccaaaggccaccccggtgcgcaaatccgcgataacgccatg
tccaaggcgcgctttgaattccgctgggaagaccagtttaatctggcgctcgacccggaa
accgcccgtgcctaccacgatgaaaccctgccgcaggaatccggcaaggtggcgcatttc
tgctcgatgtgcgggccaaaattctgctcgatgaaaataacgcaggaagtgcgcgactac
gccgcccgccagcaaacgcaatcgatagacgtcggcatggcaaacatgtccgccgaattt
cgcgcccgtggcagcgagctgtaccacagtgccgccgcgaccagcctgccgcaggaggag
cgttga
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