Dickeya lacustris: O1Q98_10410
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Entry
O1Q98_10410 CDS
T08984
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00071
Fatty acid degradation
dlc00280
Valine, leucine and isoleucine degradation
dlc00310
Lysine degradation
dlc00362
Benzoate degradation
dlc00380
Tryptophan metabolism
dlc00410
beta-Alanine metabolism
dlc00640
Propanoate metabolism
dlc00650
Butanoate metabolism
dlc00907
Pinene, camphor and geraniol degradation
dlc00930
Caprolactam degradation
dlc01100
Metabolic pathways
dlc01110
Biosynthesis of secondary metabolites
dlc01120
Microbial metabolism in diverse environments
dlc01200
Carbon metabolism
dlc01212
Fatty acid metabolism
Module
dlc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
O1Q98_10410 (fadB)
00650 Butanoate metabolism
O1Q98_10410 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
O1Q98_10410 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
O1Q98_10410 (fadB)
00310 Lysine degradation
O1Q98_10410 (fadB)
00380 Tryptophan metabolism
O1Q98_10410 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
O1Q98_10410 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
O1Q98_10410 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
O1Q98_10410 (fadB)
00930 Caprolactam degradation
O1Q98_10410 (fadB)
Enzymes [BR:
dlc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
O1Q98_10410 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
O1Q98_10410 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
O1Q98_10410 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
O1Q98_10410 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
NAD_Gly3P_dh_N
Pyr_redox_2
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
WFN54123
UniProt:
A0ABY8G275
LinkDB
All DBs
Position
2292631..2294820
Genome browser
AA seq
729 aa
AA seq
DB search
MIYQGDTLYLAWREDGIAELVFAAPGNINTLDTRTVASLGEALRHLAQQPDLRALLLRSD
KPAFIAGADITEFLSLFAAPTQTLQRWLTQANAIFSQLEDLPVPTLSAINGYALGGGCEC
VLATDFRVASREARIGLPEVKLGIMPGFGGTVRLPRLIGVDNALEIIAAGKDLCAADALH
VGLIDALTEQEALLPAALHMLRQAISGKLDWRARRRQKTAALRLGRSEAMMSFLTAKAKV
QQLTGPHYPAPLTAVNTIEATAGLARDAALLQETENFVALTQTSAASALVGVFLNEQAVK
SAAKKWAAGARAPERLAVLGAGIMGGGIACQAARKGIPVWMKDIRDAALTLGMTEATQRL
HADVERGKMDVMTLAQTLARIHPTLHDNAIEQADLVIEAVVENPQVKASVLAEAEAHLSE
RALLVSNTSTISITQLASALKRPENFCGLHFFNPVHRMPLVEVIRGAKTSEQTLAAVVAF
AAKMGKTAIVVNDCPGFFVNRVLFPYFAAFSLLMRDGADFRDIDAVMESRFGWPMGPAYL
LDVVGLDTAHHAQAVMSAGFPQRMAKTERDVIDVLVEHQRLGQKSGAGFYRYHTDDKGKQ
RREHDAQTDVLLDAVCQPRRTFSADEIIERLMVPMLNEVARCLEEGIVASPAQADMALLY
GLGFPAFRGGACRYLDTLGAERYAHIAQSLAGLGPLYRLPESLQQMAQQQQCFYPAALPH
ADLSLHHPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaggcgacaccctttatctggcgtggcgtgaggatggtatagccgagctg
gtgtttgccgcgccgggcaacattaacacgctcgacacacgcaccgtcgccagtctgggc
gaggcgctacgccacctggcgcaacagcctgacttacgcgcattgctgctgcgctcagac
aaaccagcctttatcgctggtgccgatatcacggaatttctgtcgttgtttgccgcacca
acgcaaacgctgcaacgctggctgacacaggcgaatgccattttcagccaactggaagat
ttacccgtgcccaccctgtccgccatcaacggttatgcgctgggcggcggctgtgaatgc
gtgctggcaacggattttcgcgtggcctcccgcgaggcacgcatcggtttacccgaagtc
aaactcggtatcatgccgggatttggcggcaccgtgcggctgcctcgtcttatcggcgtt
gacaatgcgctggagataatcgccgccggtaaagacctgtgcgccgccgatgcattacat
gtcgggctgattgatgccctcaccgagcaagaggcattgcttccagcggcgctgcatatg
ttgcgccaggccatcagcggcaagcttgactggcgcgctcgccgccgccagaaaaccgct
gcgctacggttaggccgcagtgaagcgatgatgagttttctcactgccaaagcgaaagtg
cagcaactcaccggcccgcactatcccgccccactgaccgctgtgaacaccattgaagcg
accgccggactggcgcgtgatgcggcactgttgcaggaaacagagaatttcgtcgcactc
acacaaacctctgccgcctcagcgctggtgggcgtgtttttgaatgagcaggcggtaaaa
agcgccgcgaaaaagtgggccgcaggagcgcgcgctcccgagcgcctcgcggttcttggc
gcaggcatcatggggggcggcattgcgtgtcaggccgcccgcaaaggcatccccgtctgg
atgaaagatatccgcgacgccgcattgacactgggtatgacagaagcgacgcaacggctg
catgccgacgtcgaacgcgggaaaatggatgtgatgacgctggcacagacgctggcgcgc
atccaccccacgctgcatgacaacgccattgagcaggccgacctggtgattgaagccgtg
gtggaaaacccgcaggtgaaagccagcgtgctggccgaggcagaagcccacctcagcgag
cgggcgctgttggtttctaacacctcgaccatttctatcacccagcttgccagcgccctg
aagcggcccgagaatttttgcggcctgcactttttcaatccggtacaccgtatgccgctg
gtcgaggttattcgcggtgccaaaaccagtgaacaaacgctcgcagccgtcgtcgccttt
gccgccaaaatgggtaaaaccgccattgtcgtgaatgactgcccaggctttttcgttaac
cgtgtgctgttcccctattttgccgcattttcgctgttgatgcgtgacggcgcggatttc
agagacattgatgcggtgatggaatcccggtttggctggccgatgggcccggcgtatttg
ctggatgtggtcgggctggataccgcacatcatgcacaagccgtcatgtccgccgggttt
ccacagcgcatggcaaaaaccgaacgggatgtgattgatgtgctggtcgaacaccagcgt
ttgggccaaaaaagcggtgccggtttctatcgctatcacaccgatgataaaggcaagcaa
cgccgcgagcacgatgcgcaaacggatgtattactcgatgcggtatgccagcccagacgc
acatttagtgccgatgagattatcgaacggctgatggtgcccatgctcaacgaagtggcg
cgctgtctggaagagggcattgtggcaagcccggcacaggcggatatggcactgctttat
gggctcggttttcccgcttttcgcggcggtgcctgccgctatctcgacaccctcggtgcc
gagcgttatgcgcacatcgcgcagtcgctggctgggcttgggccactctaccgcctgcct
gagagcctgcaacagatggcgcaacagcaacagtgtttttatccggcggccttgccacac
gccgatttatctcttcatcacccggcataa
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