Dickeya lacustris: O1Q98_10440
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Entry
O1Q98_10440 CDS
T08984
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00860
Porphyrin metabolism
dlc01100
Metabolic pathways
dlc01110
Biosynthesis of secondary metabolites
dlc01120
Microbial metabolism in diverse environments
dlc01240
Biosynthesis of cofactors
Module
dlc_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
dlc_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
O1Q98_10440 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dlc04147
]
O1Q98_10440 (hemB)
Enzymes [BR:
dlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
O1Q98_10440 (hemB)
Exosome [BR:
dlc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
O1Q98_10440 (hemB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
WFN57616
UniProt:
A0ABY8GC61
LinkDB
All DBs
Position
complement(2299520..2300542)
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AA seq
340 aa
AA seq
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MSTAFPGTFPGRRMRRLRRHDFSRRLVSEHQVTVNDLIYPVFVMEGKNGRQEVPSMPGVY
RLTIDELVKEAEVIAKLGVPVLSLFPVIEADKKSLLAEEAYNPDGLVQRTVRALKDAVPE
LGLLTDVALDPYTTHGQDGVIDDDGYVINDITKEILVRQALSHAQAGAEIVAPSDMMDGR
IGAIRDQLETQGLINTQIMAYSAKYASCYYGPFRDALGSSGNLKGGNKKTYQMDPANSNE
ALQEIAQDLQEGADMVMVKPGMPYLDVVRRVKDTFGVPTFAYQVSGEYAMQMAAIQNGWL
QEQPLVMESLLCFKRAGADGVLTYFAKRVAQWLHDEAQRR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcttttcccggtacgtttcctgggcggcgtatgcgccgcctgcgtcgccac
gattttagccgtcgtctggtgtctgaacatcaggtgacagtcaatgacctgatctacccg
gtatttgtgatggagggtaagaatgggcgtcaggaagtgccgtctatgccgggggtgtat
cgcctgacgattgatgagctggtaaaagaagcggaagtcatcgccaaactgggggtgccg
gtattgtcgctgttcccggtaattgaagcggataagaaatcactgctggcggaagaagcc
tataacccggacgggctggtgcaacgcaccgtgcgagcgctaaaagatgccgtgccggag
ctcggattgctgacggatgttgcgctagacccctacaccacgcatggtcaggacggcgtg
attgatgatgacgggtatgtgattaatgacatcaccaaagagattctggtgcgtcaggca
ctgtcccatgcgcaagccggggcggaaattgtcgcccccagcgacatgatggatgggcgt
attggcgcgattcgcgatcaactggaaactcagggtctgatcaatacccaaatcatggcc
tattccgcaaaatatgcgtcctgctattacggcccgtttcgtgatgcgttgggctcatcg
ggcaatctgaaaggcggcaataagaagacctatcagatggacccggccaacagtaacgaa
gcgctgcaagagatagcgcaggatttgcaggaaggggcggatatggtgatggtcaaaccg
gggatgccgtatctggatgtggtgcgccgggtgaaagacacgttcggcgtgccgacattc
gcctatcaggtatcaggcgagtatgccatgcagatggcggcgattcagaacggttggttg
caagaacagccgttggtgatggagtcgctgttgtgctttaaacgcgcgggggccgatggc
gtattaacgtattttgccaagcgtgtcgctcagtggttgcatgacgaagcgcaacgccgc
taa
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