Dickeya lacustris: O1Q98_11935
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Entry
O1Q98_11935 CDS
T08984
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dlc
Dickeya lacustris
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlc03016
]
O1Q98_11935 (rnz)
Enzymes [BR:
dlc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
O1Q98_11935 (rnz)
Transfer RNA biogenesis [BR:
dlc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
O1Q98_11935 (rnz)
Prokaryotic type
O1Q98_11935 (rnz)
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Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
WFN54396
UniProt:
A0ABY8G371
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All DBs
Position
complement(2629556..2630485)
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AA seq
309 aa
AA seq
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MELIFLGTNAGVPTQTRNVSSLALDLHGIRPAFWLFDCGEGTQHQILRTPVKPGKLEKIF
ITHLHGDHIFGLPGLLCSRAMGGIDTPLTLYGPCGLKAFVEQALTLSGSYLTYPLNIIEL
DVKEGESARVCEDERLQVTACVLSHTLYCLGYRIEERPKPGPLNVAKLAADGVKPGVWFQ
HLRRGETVTLDDGRVLNGWDYVGPATPGKSLAIFGDTRPTPAAGLLAAGVDVMVHEATLE
GAMAERASERGHSTTLQAAAAARDAGAKRLIITHFSARYGQADLARLRQECQTVFAATEV
ASDFATFRV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatttttctcggcaccaatgccggtgtgccaacccaaacgcgcaacgtcagt
agtctcgcgcttgatttgcacggcatccggcctgcgttttggttgtttgattgcggcgaa
ggcacccagcaccaaattttgcgcaccccggtcaaaccgggcaagctggagaaaatcttc
atcacccacctgcacggcgaccacattttcggcttgccgggcctgttgtgctcgcgcgcg
atgggcggtatcgacacgccgctcacgctctacgggccatgcgggttaaaagcctttgtc
gagcaggcgctgaccctcagcggttcctatctgacttatccgctcaatatcatcgagctg
gatgtcaaagagggggaatcggcgcgggtctgtgaggatgaacgcttacaggtcacggcc
tgtgttctctcccacaccctgtattgcctgggctaccgtattgaagaacgccccaaaccg
gggccgctgaatgtggcgaaactggcagccgacggcgtaaaacccggcgtctggtttcag
catctcaggcgcggcgaaaccgtcacgctggatgacggtcgggtgctgaacggctgggat
tatgtcggccccgccacaccgggtaagtcattggctatcttcggcgacactcgccctacg
cctgcggcaggcctgctcgcggcaggcgtggatgtgatggttcatgaagcgacgctggaa
ggagccatggccgagcgtgccagcgaacgcggccactccaccacgttacaagccgccgcc
gccgcacgggatgccggggccaaacggctcatcatcacccatttcagcgcccgctacggg
caggcagacctggcgcggttacgtcaggaatgccagacggtgtttgccgccaccgaggtg
gcaagcgactttgccaccttccgggtgtaa
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