Dickeya lacustris: O1Q98_13945
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Entry
O1Q98_13945 CDS
T08984
Symbol
mscM
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
dlc
Dickeya lacustris
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dlc02000
]
O1Q98_13945 (mscM)
Transporters [BR:
dlc02000
]
Other transporters
Pores ion channels [TC:
1
]
O1Q98_13945 (mscM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
WFN54754
LinkDB
All DBs
Position
complement(3058833..3062153)
Genome browser
AA seq
1106 aa
AA seq
DB search
MRLILILLLGCWLSVTSQAAQLPDEAQLRQELQQAENSKNAAAQADTIKEWQSALRLLDE
RRETRQRADAYQQAIDDYPRLTRELRQQADAEEAKPSQPTKTGSANELEQQIVQLSSQLL
EQSRQLQQEQDRLREISDSLAQLPQQQTEANRALSDAERRLQALGNPATAQGQAQLAALQ
AEVALRKSRVEELELAQLSASNRQELSRLQADVYKKRRDRLDKQLQLLRSTLNNLRQREA
EQALERTEQLAEQQGNLPSAVTSLLQTNRELSLALNQQAQRMDSIAALQRQTTAQTLQVR
QALSTLREQAQWLGSSPALGETLRAQVARLPDTPKPQQLDGDMAQQRAHRLYYEEMLNKL
AASAEPTRQDDGSPLTSAQQKIVNDQLRTQRDLLGSLISGCDTQILEFTKLKVASSQLED
ALTEIRDAAHRYLFWVADVDPIGFAYPLNLLRDLSRVLSLDTLTQLSSALLMMGTTQTTL
LPLLAALLLVALSISSRRHYHAFLERASGRVGKVTLDYFMLTLRTVFWSVMVAMPLPVLW
AVLGYGLQNAWPYPVAVAIGDSVTATVPLMWVVMICAAFSHRQGLFIVHFGWPPKQVARA
MRYYRLSIGFIVPLVMALITFDNLNEREFSGTLGRLCFILLCMALSLVTTSFKRAGIPLY
LDKEGSGENPVNRAMWNLMICIPLIAALASCLGYLTTAQALLARLETSVSIWFFLLVIYH
IIRRWMLIQRRRIAFDRARQRRAEILAARARGEEEANTAHENSAEAVDEPVVDLDAISAR
SLKLVRSLLTLIALVSVIALWSEIHSAFAFMENIHLWDVTSTVKGVESVQPITLAAVLIA
LLVFIITAQLVRNLPALLELAILQHIELSPGTGYAITTVSKYLMMLIGGLTGFSLIGIEW
SKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVMRINTRAT
TITDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLSIPAPAEANTQEVTALLLNAVKRC
SLVLDNPPPEVYLVDLRQGIQIFELRIFAAEMGHRMPLRHELHQLILESYRQHHLVMPFP
PFQVQMDSVQITGRNAATSTRTTGGV
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcttatcctgattttgctgttgggatgttggttatccgtcacgtcgcaggccgcg
caattacccgatgaagcgcaactcaggcaggagctccagcaggcggaaaacagcaagaat
gccgctgcgcaggcggacaccatcaaggaatggcagtctgcattgcggctattggatgag
cgccgggagacgcgccagcgcgccgacgcttatcagcaagcgattgacgattatcctcgg
ttaacgcgagagctgcgtcagcaagccgatgcagaagaggccaaaccgagccagccgaca
aaaaccgggtcagccaacgaactggaacagcagatagtccagttaagtagccagttgctc
gaacaaagccgccagctacagcaagagcaggatcgcctgcgcgaaatcagcgactcactg
gcccagttaccgcagcaacaaactgaagccaaccgcgccctgagcgacgccgaacggcgt
ttgcaagccctcggcaacccggccaccgcccaaggtcaggcgcagctggccgcattgcag
gcggaggttgcgctacgtaaaagccgggtcgaggagctggagctggcacagctatcggcc
agcaaccgacaagagttatcccgcctgcaagcggatgtttataaaaagcggcgcgacaga
ctggataagcaattacagctattacgcagtacgctcaataacttacgccagcgcgaagcc
gagcaggcgctggagagaacggaacaactggcggaacaacagggtaacttgccctcagca
gtcaccagcctgctacagaccaatcgggagctctctctggcgctgaatcagcaggcgcag
cgcatggatagcattgccgcgctccagcgccaaacgaccgcccagacactgcaagttcgt
caagcattaagcaccctgcgtgaacaggcgcaatggcttggttcatcgcccgcactgggg
gaaacgctgcgtgcgcaggtggcccgactgccggacacgcccaagcctcaacagcttgat
ggcgacatggcacaacagcgcgcccaccggctctactatgaagagatgctcaataagctc
gccgccagcgcagaaccaacgcgacaggatgatggctcgccgctcaccagcgcccagcag
aaaatcgtcaacgatcagctacgcacccagcgcgatctgctgggatcgctcatctccggc
tgcgatacgcaaatccttgagttcaccaaactcaaggtagccagcagccaactggaagat
gcgctgacggaaatccgtgatgccgcccatcgttacctgttctgggtggcggatgttgac
ccaattggttttgcctatccgctcaacctgctgcgcgatctctcgcgcgtgttatcgctc
gatacgctaacgcaactgagcagcgcactactgatgatgggcaccacccagacgacgctg
ctgcccctgctggcagcactgctgctggttgccctgagtatcagctcacgccgccattat
catgcctttttggagcgcgccagtggccgggtcggaaaggtcacgctcgactattttatg
ctgacgctgcgcaccgtgttctggtcggtgatggtggcgatgcccttgccggtcttgtgg
gcggtgctgggttatggcctgcaaaatgcctggccttacccggtcgcggtggccatcggc
gacagcgtgaccgccaccgtccccttgatgtgggtagtgatgatctgcgcggccttttcc
caccgtcagggactgttcatcgtacactttggctggccgccgaagcaggtagctcgcgcg
atgcgctactatcgcctctcgattggttttatcgtgccgctggtgatggcgctgatcacc
tttgataatctcaatgaacgcgaattctcgggtacgctggggcgtttgtgcttcattttg
ctgtgtatggcactgagcctggtgacgaccagtttcaaacgtgcgggtattccgctctat
ctcgacaaagagggctcaggcgaaaacccggtcaaccgcgcaatgtggaacctgatgatc
tgtattccactcatcgccgcgctggcctcttgcctcggttatctcaccaccgcgcaggcc
ctgctggcgaggctggaaacctcggtgtctatctggtttttcctgctggtcatctaccat
atcatccgccgctggatgctgattcagcgtcgccgcatcgcgtttgaccgcgccaggcag
cgccgtgctgaaatcctggcggcgcgggccagaggcgaggaagaggccaataccgcgcac
gaaaacagcgcagaagccgtggacgagcccgtcgtcgatttggatgccatcagcgcacgc
tcattaaagctggtacgttcgctgctgacattaatcgcgctggtgtcggtgattgcatta
tggtcagaaatccactccgcgtttgcgtttatggagaacatccacctgtgggatgtcacc
agcacggtaaaaggcgtggaaagcgtccaaccgattaccctcgcagccgtgctgattgcc
ctgctggtgtttatcatcaccgcacaactggtgcgtaatcttcccgcgctgctggagctg
gcgatactccagcacattgaactgtcacccggtacgggctacgccattacaacggtcagt
aaatacctgatgatgctcatcggcggcctgaccggtttttcgcttatcggcattgagtgg
tcgaaactgcaatggctggtcgccgcgctcggtgtcgggctaggcttcggtttgcaggag
attttcgccaactttatctccgggttgatcattctgtttgaaaaaccgattcgcattggc
gataccgtcaccattcgcgatttgaccggcagcgtgatgcgcattaacacccgcgccacc
accatcaccgattgggatcgcaaagagataatcgtgcccaacaaagcgtttattaccgag
cagtttatcaactggtcgctgtctgactcggtcacgcgcgtggtgctctccatcccggca
ccggctgaggccaatacccaagaggtgacagcgctgctgctcaatgcggtcaaacgctgc
tcgctggtgctggataatccgccgccggaggtgtatttggtggatttacgtcagggtatc
cagattttcgagctgcggatcttcgccgccgaaatgggccaccgcatgccgctgcgccac
gaattacaccagttgattctggaaagctatcgccagcatcatctggtgatgccattcccg
ccgttccaggtgcaaatggactccgtacagataaccggacgtaacgccgccacctcaacc
cgtactacggggggggtgtaa
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