Dickeya lacustris: O1Q98_16830
Help
Entry
O1Q98_16830 CDS
T08984
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dlc
Dickeya lacustris
Pathway
dlc03030
DNA replication
dlc03430
Mismatch repair
dlc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O1Q98_16830 (dnaE)
03430 Mismatch repair
O1Q98_16830 (dnaE)
03440 Homologous recombination
O1Q98_16830 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlc03032
]
O1Q98_16830 (dnaE)
03400 DNA repair and recombination proteins [BR:
dlc03400
]
O1Q98_16830 (dnaE)
Enzymes [BR:
dlc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O1Q98_16830 (dnaE)
DNA replication proteins [BR:
dlc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O1Q98_16830 (dnaE)
DNA repair and recombination proteins [BR:
dlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O1Q98_16830 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MutS_II
Motif
Other DBs
NCBI-ProteinID:
WFN55258
UniProt:
A0ABY8G5Q1
LinkDB
All DBs
Position
3716555..3720037
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKIGPLVKKAASLGMPALAITDFTNLCGLVKFYGGAHGA
GIKPIIGADFFLQSDELGDELAHLTVLAMNNEGYQNLTLLISRAYQRGYGAAGPTIERSW
LVEHQAGLLLLSGGRHGDIGKFLLRGNQAQVEQSVAFYQQHFPQRFYLELIRTGRPDEES
YLHAAIELATAHGLPVVATNDVRFISAEDFDAHEIRVAIHDGFTLDDPKRPRHYSTQQYM
RSEAEMCELFADIPEALVNSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDYLVMCSRKGL
EERLTFLFPDESERAKRRLEYDERLEIELNVINQMGFPGYFLIVMEFIQWSKDNNVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LGEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDQEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKQGQEPVDIAAIPLDDKRSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHETLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFKEGAERMGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKIVGLVDECWRMGLKILPPDINSGLYHFHVNHDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRDLFDLCARTDIKKLNKRVLEKLIMSGAFDRLGPHRAALMN
SLADAMKSAEQHAKAEAIGQADMFGVLADTPEQVEQSYSTVPPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYAGGVRLKDMHPTERGKMTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEVMLFTDALDRYQHLLEQDRILIATGQVSFDDFSGGLKMTVRELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRQDARARLRFGAAWRVTPTD
ALLNALRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgttcacctgcgtgttcacagtgactattccatgatcgatggg
ctggcgaaaatcggcccgttggtaaaaaaagcggcctcgctgggtatgccggcgctggcg
attacggactttaccaacctgtgcggattggtgaagttctacggcggagcgcacggcgcg
ggcatcaagccgattattggtgcggatttctttcttcagagtgacgagctgggcgatgaa
ctggcgcatctgaccgtactggcgatgaataacgaaggctaccaaaacctgacgctactc
atttccagagcctatcagcgcggttatggcgcggccggcccgacgattgaacgctcatgg
ctggttgagcatcaggcggggttgttgctgctttccggtggccggcacggtgatatcggt
aaatttctgttacgcggcaatcaggcgcaggtcgagcagagcgtcgcgttttatcaacag
cattttccccagcgcttttatctggagctgattcgcacggggcggccggatgaagagagt
taccttcatgctgcgattgagcttgccaccgcgcatggcttgccggttgtggccaccaat
gatgtgcgttttattagcgctgaagattttgatgcccatgaaattcgcgtcgccattcat
gatggcttcacgcttgatgacccgaaacggccacgccattacagcactcagcaatacatg
cgcagcgaagcggaaatgtgcgagctgtttgccgatattcctgaagcgctcgtcaactca
gttgaaatcgccaagcgttgcaacgtgactatccgcctcggtgagtatttcctgcctcag
tttccaaccggcgatatgtcaacggaagactatctggtgatgtgctcgcgaaaagggctg
gaagagcgtctgacgtttctgtttcctgatgagagtgagcgtgccaagcgtcggctggaa
tatgacgagcgtctggaaatcgaactgaatgttatcaaccagatggggttccccggttac
ttcctgatagtgatggagttcatccagtggtcgaaagataacaacgtgccggttggccct
gggcgaggctctggcgcgggctcgttggtggcgtatgcgctgaaaattaccgatctcgac
ccactggagtttgacctgctgttcgagcgcttcctcaacccggaacgcgtgtcgatgccg
gacttcgacgtcgatttttgcatggaaaagcgcgatctggtgatagaccatgttgcggat
atgtatggccgtgatgcggtatcgcaaatcatcaccttcggtacgatggcagcgaaagcg
gttatccgtgacgtggggcgcgtgctggggcatccctatggctttgtggatcgtatttcc
aaactggtgccgcccgatcctggcatgacgctggaaaaagcctttgccgccgagccgcag
ctgggtgaaatttacgaagcggatgaagaggttaaagcgctgatcgatatggcgcgcaag
ctggaaggtgtgacccgcaatgccggtaaacacgccggtggtgtggttatctcgccgacc
aaaattaccgatttcgccccgctgtattgcgatcaggaaggcaatcatccggttacgcag
tttgataaaaacgatgtggaatatgcagggctggtgaagtttgacttcctcgggctgcgt
acgttaaccatcatcaactgggcgcttgagatgatcaacgcccggcgcgcgaaacagggg
caggagccggtggatatcgccgccatcccgctggatgacaagcgaagtttcgacatgctg
caacgctcggaaaccacggcggtattccagcttgaatcgcgcggcatgaaagacctgata
aagcgcctgaaacctgactgcttcgaagacatgatagcgctggtggcattgttccgcccc
ggccccttgcagtctggcatggtggataactttatcgaccgtaagcacgggcgagaggcg
atttcctacccggatatccagtggcagcatgagacgctgaaaccggtgctggaaccgacc
tatggtatcatcctgtatcaggaacaggtgatgcagatagcccaggtgctggcgggttat
acccttggcggcgctgacatgctacgccgggcgatggggaagaaaaaacccgaggagatg
gccaagcagcgctcagtgtttaaagagggcgcagagaggatgggcgttgacggcgagctg
tcgatgaaaatcttcgatttggtggagaaatttgccggttatggctttaacaagtcgcat
tcggcagcgtatgcgctggtctcctatcaaaccctgtggctcaaggcgcattatccggcg
gagtttatggcagcggtgatgaccgccgatatggacaacaccgataagattgttggcctg
gttgatgagtgctggcgtatggggctgaagattctgccgccggacatcaacagcggtttg
taccatttccacgtcaatcatgatggtgaaatcgtctatggcatcggggcgattaaaggg
gttggcgaagggccgatagaggcgattattgaggcgcgcaataacggcggttatttccgc
gacctgtttgatttgtgcgcgcgtaccgacattaaaaagctcaacaagcgggtgcttgaa
aagctgattatgtccggtgcgttcgacaggttgggccctcaccgcgcagcgctgatgaat
tcactggccgatgcgatgaaatcagccgagcaacatgccaaagcggaagccattggtcag
gcggatatgtttggcgtgctggccgatacgcctgaacaggtggaacaatcttacagtacc
gttcctccgtggccggagcaggtggtgcttgatggtgaacgcgagacgctggggctttat
ctgaccggccacccgataaatcagtacctcaaagagatcgaacgctacgcgggaggcgtg
cgtttgaaagatatgcaccctacggaacggggaaaaatgaccacagccgttgggttggtg
ttggccgcacgggtgatggtcacgaagcgcggtaatcgcatcggcgtgtgtacccttgac
gatcgttctggtcgtctggaggtgatgttgtttaccgatgcgttggacagataccagcat
ttgctggagcaggatcgcattttgatagccacgggacaggtcagctttgatgactttagt
ggcgggcttaaaatgactgtcagagagcttatggatatcagcgaagcgcgtgaaaaatat
gcgcgcgggcttgctatctcgctgactgacaggcaaattgatgaccagttgttaaaccgt
cttcgtcagtcgttggaaccccatcgatcggggacgattccggtacacctttactaccag
cgtcaggatgcgcgagcccggttacgtttcggtgccgcatggcgtgttacaccgaccgat
gcgttactgaacgctctgcgcaccctggtgggtaatgagcaggtagagctggaatttgac
taa
DBGET
integrated database retrieval system
