Dickeya lacustris: O1Q98_16980
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Entry
O1Q98_16980 CDS
T08984
Name
(GenBank) SbcC/MukB-like Walker B domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dlc
Dickeya lacustris
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlc03400
]
O1Q98_16980
DNA repair and recombination proteins [BR:
dlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O1Q98_16980
Archaeal homologous recombinant proteins
O1Q98_16980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
NTPase_1
cobW
AAA_21
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
WFN55287
LinkDB
All DBs
Position
complement(3750652..3754335)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTREPFASNSLFAITGPTGAGKTTLLDAICLALYHQTPR
LKVSPSQNELMTRHTADCLAEVEFEVKNVAYRAFWSQRRAHNSPEGNLQPPRVELALCAD
GKILTDKVNDKLAMIDDITGLDFDRFTKSMMLSQGQFAAFLNADANQRAELLEELTGTDI
YGQISEQVFEKHKQAHIQLDTLKAKVATLELLSDEQRRALEQQLDFIRQQEHALSLQREE
ILTHQRWHDTLLQHQQTQRQVKQQREAFEQLQRQSQTQIEKLRRSEPAEKLRPQLNERER
AQKEKQRLQAQLTLLRQQTTRQQDALNLLKIQLEKALIVRKQHAEQRQQQETLINERVQP
LDHQIATLQTQRTQQQQALDSLLEQQKTLIATLSRVQRQREQTQQQLAEVENYRQQHHSH
QYLGSHIPLWQAQFPQQQKWQQDLLVWQEKKAQQQIQSEYLEQQYQLLTEKQLAQQKACE
RARQLLSEHQQHNTQQEESQPLETLRQQLESHVAQQSDRQQLATHSAVLQQLLSQRTSLE
AQYLDTQRRIEALEQQQTQLRQAHQRQAEHLTDLEKRHELELRIVSLENERQQLQPGKEC
PLCGATHHPAVARYQALRPSETQIRLHALRQEVETLQASVVQATTQLQLQEQQRQQQQNA
IQRVQHDFDVLLQQCQIVSKRLLIDFDPLQSVTLNQWLEDAVTKEQALQSHIASRERSLR
HIQESKDLLTSAEQLLSHTQQQLALNAQQRHALQQAQDELRLSLDKTERELQRLHDSISQ
TLAIFQLQAPVLEHQEAWLRQRQTEWLRWQESELEQNRCQPQLAAQEAEIAASQQRLTDV
DAALMTGQQQLADTLSVLDNARQQRWQLMGNQSISDMLAQLRQQSQALEQDVQQAQQQWQ
QAQSLSSRLSGEVASLEQQEQHVENQLQQAIGAFSAALNAAGFADETAFGYALLNETERT
QLLALEEKLKQRAQQVDALQQQADSALEQHMRARPESMPDDVNQEDIRQLLLSLGAMAKA
EVSQQGELQQQLASDQQRREKQRVLLEAIARAELTCEDLGYLNQLIGSQKGDKFRRFAQG
LTLDHLVFLANRQLARLHGRYLLQRKTSDTLELQVADTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSAKTRIDSLFLDEGFGTLDGETLDTALDVLDNLNASGKTIGVISHVEAMK
DRIHVQIRVKKRNGLGISQLDSVYAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagtttgcggctgaaaaatctcaactccctgcaaggcgaatggaaaatc
gatttcacgcgcgagccttttgccagcaacagtctgtttgctatcactggcccgaccgga
gcgggaaaaaccacgttactcgacgcaatctgccttgcgctctaccatcaaacgccgcgt
ctaaaagtcagccccagccagaatgaactgatgacgcgacacacggccgattgtctggct
gaagtcgagtttgaagtcaaaaacgttgcctatcgcgctttttggagtcaacggcgcgcg
cataacagcccggagggtaacttgcagccgcccagagtcgaactggctttgtgcgccgat
ggcaaaatcctcacggataaggtgaacgataagctggcgatgatcgatgatatcaccggc
ctggatttcgatcgctttaccaaatcgatgatgttgtcacaagggcagtttgccgctttt
ctcaatgccgatgccaaccagcgtgccgaattgcttgaagagctcaccggcacagatatt
tatgggcaaatatccgagcaggtatttgaaaaacacaagcaggcgcatattcagctcgac
acactgaaagccaaagtcgccacgcttgagcttctcagcgatgaacagcgccgcgcgctt
gaacaacagctggattttattcgccagcaagaacacgccttgtcgctgcaacgagaggaa
attctgacccatcaacgctggcacgataccctgctacaacaccagcaaacacagcgacag
gtaaaacaacagcgcgaagcgtttgaacagttacagcgccagtcacagacccaaatcgaa
aaattgcgccgcagcgagcctgctgaaaaactgcgcccgcagctcaacgaacgcgagcgc
gcgcaaaaagagaaacagcggctgcaagcacagctgaccctgttgcgacagcagacaacc
cgccagcaagatgcgctgaacctactgaaaattcagttagaaaaagcgctaatcgtgcgt
aagcagcatgccgagcagcgccagcaacaagagacgctcatcaatgaacgcgtccagcct
cttgatcatcaaatcgctacgctacaaacccagcgcacgcaacaacaacaggcgctcgac
agcctgctggagcagcaaaaaacgctgattgccacgctttccagagtgcaacgccagcgc
gagcaaacccaacaacagctggcggaagtagaaaactaccgccagcaacatcacagccat
cagtacctcggcagccatattccgctctggcaagcgcaatttcctcagcagcaaaaatgg
caacaggacttattggtctggcaggaaaaaaaagcgcagcaacagattcaatcagaatac
cttgaacagcagtatcaactgctgacggaaaaacagcttgcccagcaaaaagcctgtgag
cgcgcccggcaattactgagcgaacaccagcaacacaacacgcaacaagaagagagccaa
ccgctggagacgctgcgccagcaactggagtctcacgtcgcccaacagtccgatcgccag
cagctagccacgcacagcgccgtgctacaacagttactgagccagcgcacctcgcttgaa
gcacagtatctcgatacccaacggcgcattgaggcgcttgagcaacagcaaacgcagttg
cggcaggcacatcaacgtcaggcggagcatttgaccgatctggaaaaacggcatgaatta
gaactgcgcattgtgagtctggaaaatgagcgccagcaattgcaaccgggtaaagagtgc
ccgttgtgcggcgcaacgcatcatcctgccgtggcgcgttatcaggcactgcgccccagt
gaaacccagatacggttacatgcgctgcgtcaggaggtcgaaacgctgcaagcaagcgtc
gtacaagcgaccacacaattgcagttacaggagcaacaacgccaacagcagcaaaacgct
atccagcgcgtacagcatgattttgatgtcctgctgcaacagtgccagatcgttagtaaa
cgcttactgattgattttgatccgctacaaagcgtcaccctgaaccagtggctggaagat
gccgtcaccaaagagcaagcgctacaatcacatatcgccagccgcgagcgcagcctgcgc
catattcaggaaagtaaggatttactcacatccgccgagcagttgttgtctcacacacaa
caacaactggccctgaacgcccagcaacgccatgcattgcaacaggcgcaggatgagtta
cgtctatcgctggataaaaccgaacgtgagttacagcgtctgcatgacagcatcagccag
acgctggccatattccagttgcaggccccggtgcttgagcaccaagaagcgtggctacgc
caacgtcaaactgagtggttacgctggcaagaaagcgagctcgaacaaaatcgctgccag
ccgcaactggcggctcaggaagcagaaatcgcagccagccagcagcgtttaacggatgta
gacgccgcgttaatgaccggccaacagcaattggccgacaccctaagcgtcctcgacaac
gcgcgccagcaacgctggcaattgatgggcaaccagagcatcagcgatatgctggctcaa
ttacgccagcaaagtcaggcgctggaacaagatgttcagcaagcgcagcaacagtggcaa
caggcacaatcgctatccagccgtttgagtggcgaagtcgcctcgctggaacaacaagag
cagcatgttgaaaaccagttacagcaggcgataggcgcgttcagcgccgccttgaacgcg
gccggatttgctgatgaaaccgcctttggttacgccttgctcaatgaaacagagcgcaca
cagctactggcactggaagagaagctaaaacagcgagcacagcaggttgatgccctgcaa
caacaggcggatagcgcactggagcagcatatgcgcgcgcgcccggaatcgatgcctgat
gatgtcaaccaggaagatatccgccagttacttttaagcctgggtgcgatggccaaagcc
gaagtgtcacaacaaggtgaattgcagcaacagctggcaagcgaccagcagcggcgcgag
aaacagcgggtattgcttgaagcgattgcccgcgcggagttgacttgcgaagacttaggc
tacctcaaccagttaattggttcgcaaaaaggtgacaaattccgacgttttgcccagggc
ctcacgttggatcatctggtgttcttagccaaccgccagttagcccggttgcatggccgc
tacctgttgcaacgcaagacatccgatacgctggaattacaggttgcggacacctggcag
gccgatgccgtgcgtgatacccgtaccttgtccgggggggaaagctttttggtcagtctg
gcgctggcgctggcactctctgatttggtgagtgcgaaaacccgcattgactcactcttt
cttgatgaaggcttcggcacgttggatggcgaaacgctggataccgcgttagatgtgctg
gataacctgaatgcatcaggtaaaaccattggcgttatcagccatgtggaagccatgaaa
gaccgcattcacgtgcagattcgcgttaaaaaacgcaatggccttggcattagccagctt
gatagcgtgtacgcagtaaaatag
DBGET
integrated database retrieval system
