Dickeya lacustris: O1Q98_16985
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Entry
O1Q98_16985 CDS
T08984
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dlc
Dickeya lacustris
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlc03400
]
O1Q98_16985 (sbcD)
DNA repair and recombination proteins [BR:
dlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O1Q98_16985 (sbcD)
Archaeal homologous recombinant proteins
O1Q98_16985 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF4936
Motif
Other DBs
NCBI-ProteinID:
WFN55288
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All DBs
Position
complement(3754332..3755564)
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AA seq
410 aa
AA seq
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MRIIHTSDWHLGQYFYTRSRAAEHQAFLHWLVCQVETHQADALIVAGDVFDNGTPPSYAR
EMYNQFVVALQPTGCQLIVTGGNHDSVATLNESRSLLACLNTRVIAGFDGDIEEHILVLN
NRNGEPGAILCAIPFLRARELFTSKAGQSGEQKQQALQEAIASHYQACYQHACTLRTTLG
EHLPIVMTGHLTTVGVATSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVAQCEH
IRYSGAPIALSFDELNHEKSVYLVHFDQGKLQDVSTLVIPAEQPMQLVKGNLAEIERRLA
GFRDYQGEKPVWLDIEITTQDYLSDMQQHIQSLTASLNVDVLLLRRAREQQQQMLVQLDT
ETLDELQPTEVFERRLAQETELDDARRQRLRTLFGKIVRDVDEQRQEAGA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattattcatacgtctgactggcatcttggtcagtacttttacacccgcagccgc
gcagctgaacatcaggcttttctgcactggctggtttgtcaggtagaaacgcatcaggcc
gacgcattaatagtagcaggcgatgtgttcgataacggtacaccgcccagttacgcccgt
gagatgtataaccagttcgtcgtggcccttcagcctaccggctgtcagttgattgttacc
ggcggtaatcacgactccgttgctacgctcaatgaatcccgttcgctgctcgcctgtctc
aatacccgggtcatcgccggttttgatggcgatattgaagaacacattctggtgctgaat
aaccgcaacggcgaacccggcgcgattttgtgcgccataccgtttttgcgcgcccgcgag
ctttttaccagtaaagccgggcaatccggcgagcaaaagcagcaagcattacaagaggcc
atcgccagccattatcaagcctgttatcagcatgcctgcacattacgcaccacgcttggg
gaacatctgccgattgttatgaccgggcacctcacgaccgttggcgtggctacctcggac
tcggtacgcgatatttatattggtacgctggatgcgttcccggcacaggcgtttccccct
gccgattatattgctcttggccatattcaccggccacaacgcgtggcgcaatgtgagcat
attcgttacagcggtgcccctatcgccctcagctttgatgaactcaatcacgaaaagtct
gtctatctggtgcattttgaccaagggaaattacaggatgtcagtaccctggttatcccc
gcagaacagccgatgcaactggtgaagggcaatctggcggaaatcgagcgtcgattggcc
ggttttcgcgactatcagggcgagaaacccgtctggctggatatcgaaatcaccacccag
gattacctcagcgacatgcagcaacacattcaatcgctaaccgcctcgctgaatgtggat
gtcctgctgctgcgccgggcgcgagaacaacagcaacaaatgctggtacagctcgacacc
gaaacgctcgatgaactgcaaccgaccgaggttttcgagcggcggctggcgcaagaaacg
gaacttgatgacgcgcgtcggcagcggttgcgcaccctatttggcaaaattgtgcgggac
gtcgatgaacagcgtcaggaggccggtgcatga
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