Dickeya lacustris: O1Q98_17220
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Entry
O1Q98_17220 CDS
T08984
Name
(GenBank) SmdA family multidrug ABC transporter permease/ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
dlc
Dickeya lacustris
Pathway
dlc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
O1Q98_17220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dlc02000
]
O1Q98_17220
Transporters [BR:
dlc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
O1Q98_17220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
RsgA_GTPase
SMC_N
AAA_22
AAA_29
ATP-synt_ab
AFG1_ATPase
AAA_33
T2SSE
AAA_18
AAA_23
DUF87
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WFN55331
UniProt:
A0ABY8G5U5
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Position
3805706..3807472
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AA seq
588 aa
AA seq
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MRLFALLGWYFRREWKRYLGAVMLLVIIAILQLLPPKLVGVIVDGVTQHTMNQTTVLGWI
GVILLIALFTYLLRYFWRIWLFGAAYQLAVELRERFYHQLSRQHAAFYLRHRTGDLIARA
TNDVDRVVFAAGEGVLTLVDSLVMGCAVFLVMCTQLSWQLTLLALLPMPVMAIVIKHYGT
QLHQRFKEAQAAFSSLNDHAQESLTSIRMIKSFGLEDHQSGSFARVAADAGQKNMQVARV
DARFDPTIYIAVALSNLLAVAGGSWMVIHGSLTLGALTSFVMYLGLMIWPMLALAWMFNI
VERGSAAYGRIRQLLAEAPSVEDGTQSLPAGPGILAADITAFHYPGHTQRVLDDVHFTLM
PGQTLGLCGPTGSGKSTLLALLLRQFDVEEGEVRYHQQSLHHIQLDQLRCRFAVVGQTPF
LFSDTVAGNIALGRPQASLQDIERAARLANVHDDILRLPKGYETEVGERGVMLSGGQKQR
IAIARALLLEAEILVLDDALSAVDGRTEYQILNNLRQWGEKRTVIISAHRLSALVAADDI
LVLQHGRVAQRGHHGALSQQAGWYRDMYRYQQLEAALDDARDEGHEHE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagactttttgctctgctgggatggtatttccgccgggaatggaaacgttaccttggt
gcggtgatgttattggtgatcattgccattctgcaattgctaccgccaaagttggttggc
gtcatcgttgatggcgtgacacaacataccatgaaccagacaacggtattagggtggata
ggtgttatcttgctgatagcgctgttcacctatctgctgcgttacttttggcgcatttgg
ttatttggcgcggcctatcaactggccgtcgagttgcgtgagcgcttttatcatcaattg
agccgccagcatgcggctttttatctgcgccatcgaaccggcgatttgattgcccgggcg
actaatgacgtcgatcgcgtcgtgtttgctgccggagaaggcgtattgacgctggttgac
tcgctggtgatgggctgcgcggtctttttggtgatgtgtacccaactgagttggcagttg
acattgctggcactgctgcccatgccggtaatggcgatagtcatcaagcactacggcacc
cagcttcatcaacgtttcaaagaggctcaggccgctttctcctcgctgaatgatcacgct
caggagagcctgaccagcattcggatgattaagtcatttggtctggaagatcatcagtcc
ggcagttttgcccgggttgcagctgatgccggccagaaaaatatgcaggttgcgcgagtg
gatgcccgttttgaccccactatctatattgcggtggcgttatccaatctgctggcggta
gcgggcggaagctggatggttatccacggctcgttgacgcttggcgcactgaccagtttt
gttatgtaccttggtttgatgatatggccgatgctggcgttggcgtggatgtttaacatt
gtcgagcgaggcagtgcggcttatgggcgcatccgtcagttgctggccgaggccccgtca
gttgaagacggaacacaatccttacccgcagggccgggcatactggccgccgatattacc
gcgtttcattatcccggccatacccagcgtgtactggatgatgtccattttaccctgatg
ccggggcaaacgctggggctgtgtggcccgacaggttcaggtaagagtacactgctggcg
ttgttgttaaggcagtttgatgttgaagagggcgaggttcgctaccatcagcaatcgttg
catcatattcagttggatcaactcaggtgccgctttgcggtggttgggcaaacgcccttt
ctgttttctgataccgttgcgggcaatattgcgcttgggcgtccgcaggcctctttgcag
gacattgaacgcgcggccagattggcgaatgttcatgacgatattttgcgtttgcctaaa
gggtatgagacggaagttggcgagcgaggcgtcatgctttctggtggacaaaaacagcgt
atcgctattgctcgcgcgttgttactggaagcggaaatcctggtgcttgatgatgcgctc
tctgctgtcgatggacgtacggaatatcagattctcaacaatctgcgacagtggggtgaa
aagcgaaccgtgataatcagcgcgcatcgcttgtcggcgttggtagcggctgatgacatt
cttgtgttgcagcacgggcgggtagcgcaacgcggtcatcacggtgccttgtcacaacaa
gcaggatggtatcgggatatgtatcgttatcagcaactggaagcggctctggatgatgct
cgtgacgaggggcatgagcatgagtga
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