Dickeya lacustris: O1Q98_17420
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Entry
O1Q98_17420 CDS
T08984
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dlc
Dickeya lacustris
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlc03032
]
O1Q98_17420 (gyrA)
03400 DNA repair and recombination proteins [BR:
dlc03400
]
O1Q98_17420 (gyrA)
Enzymes [BR:
dlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
O1Q98_17420 (gyrA)
DNA replication proteins [BR:
dlc03032
]
Prokaryotic type
DNA Topoisomerases
O1Q98_17420 (gyrA)
DNA repair and recombination proteins [BR:
dlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O1Q98_17420 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
WFN55365
UniProt:
A0ABY8G625
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Position
3852933..3855566
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AA seq
877 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDDENISIEGLMAHIPGPDFPTAAIINGKRGIEEAYRTGRGKV
YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNHLYAQTQMQVSFGINMVALHQGQPKLMPLKDILAAFVRHRRE
VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRHASTPAEAKTALIAQAWQLGSV
SAMLERAGDDAARPEWLEPEFGIHDGYYHLTEQQAQAILDLRLQKLTGLEHERLLDEYKE
LLAQIAELLFILRSPERLMEVIREELVAIREQYNDPRRTEITHNSADINIEDLINEENVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WLKVYQLPEASRGARGRPIINLLPLEQDERITAILPVREYEEGMNVFMATASGTVKKTAL
TEFSRPRSAGIIAVGLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFCESAVRTMGRTATG
VRGISLQNDDRVVSLIVPRGEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERN
GNVVGAVQVDTADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEQVVGLQRVA
EPVEDDELDSVVPVDGELPQEESDEPEADDETPADDE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctagccagagaaattacaccggtcaacatcgaagaagagctgaaaagttca
tatctggattatgccatgtccgtcatcgtcgggcgcgcgttgccggatgttcgcgatggc
ctcaagccggtacaccgccgcgtgctgtacgcgatgagtgtgctggggaacgactggaac
aagccttataagaaatcggcccgtgtggtcggggacgttatcggtaaataccacccgcac
ggcgacagcgcggtgtatgacaccattgtgcgtatggcccagccattttcactgcgttat
atgctggtggatgggcagggtaacttcggttccatcgacggggattccgctgcggcgatg
cgttataccgaagtgcgcatgtcaaaaattgcccacgagttacttgccgatctggaaaaa
gagacggtggactttgtgccaaactacgatggcacggagcagatcccggatgtgatgcct
acccgcattccaaacctgttggtcaacggttcatccggtattgccgtcgggatggcgacc
aacattccgccccataacctcactgaagtgattaacggctgtctggcctatatcgatgat
gaaaatatcagcatcgaagggttgatggcgcatattcctgggcccgattttccgacggcg
gccattattaatggcaagcgcggcatcgaagaagcttaccggactggccgaggcaaagtg
tatatccgtgcgcgcgccgaagtggaagccgatgccaaatcgggtcgtgaaaccatcatc
gtgcatgaaatcccttatcaggtgaacaaagcacgactgatagaaaagattgccgaactg
gtcaaagaaaagcgcattgaggggatcagtgcgctgcgcgatgagtctgacaaagacggt
atgcgtatcgtcattgagattaaacgcgatgcggtcggtgaagtggtgcttaaccatctg
tatgcccagacgcaaatgcaggtgtcgtttggcatcaatatggtggcgctgcaccagggc
cagccgaaattaatgccgctgaaggatattttggccgcatttgtgcgtcatcgccgtgaa
gtcgtgacgcgccgcaccattttcgaactgcgcaaagcgcgtgagcgggcgcatattctg
gaagggctggcgattgcgctggcgaatattgacccgattattgagcttattcgtcatgca
tcaacaccagctgaggctaaaaccgcgctgattgcgcaggcgtggcagcttggcagcgtt
tccgccatgctggaacgtgccggtgatgatgcggctcgcccggagtggctggagccggag
tttggtattcatgatgggtactaccatcttaccgaacagcaggcgcaggcgattttggat
ctgcgtttgcagaaactgaccggcctggaacatgagaggctgcttgatgaatataaggaa
ctgctggcgcagatagccgagttactgtttattctgcgtagccccgagcgcctgatggaa
gttatccgtgaggagttggtcgcgattcgtgaacagtacaacgatcctcgccgcacagag
attacgcataacagcgctgacatcaacatcgaagatttgattaacgaagagaacgtggtc
gtcacgctgtcgcatcagggttatgtcaaataccaaccgctgagtgattacgaagcccag
cgtcgtggcgggaaagggaaatctgccgcgcgcatcaaagaagaagacttcatcgatagg
ctattggtagcgaatacccacgacactatcctgtgcttctccagccgtggccgtctctac
tggctgaaggtttatcaactgccggaagcaagccgtggcgcgcgtggacgtcctatcatc
aacctgctgccgctggagcaggatgaacgcatcactgcgattctgccggtacgcgagtac
gaagagggcatgaatgtgttcatggcgacggcgagcggtacggtcaagaagaccgcactg
accgagtttagccgcccgcgtagcgccgggattatcgccgtgggtctgaacgatggcgat
gagttgattggtgttgacctgacggatggcagcaacgaagtgatgttgttctctgccgaa
ggcaaggtggtgcgtttttgcgaatcagcggtgcgtaccatgggccgtacggcgaccggg
gtgcgcggcatcagtttgcagaatgatgatcgcgtggtatcgctgattgtgccgcgaggc
gagggcgacattctgaccgtcacgcaaaacggttttggtaaacgtaccgctgtaagcgag
tacccaaccaaatcccgcgccaccaaaggcgttatctccatcaaggtcagcgagcgtaac
ggtaacgtggtgggggcggtgcaggttgataccgccgatcagataatgatgatcaccgat
gccggcacgttagtgcgtacccgtgtttccgaagtcagtattgtgggacgcaatactcaa
ggggtgacactgattcgtactgccgaagatgagcaggttgtcggcttgcagcgcgtcgcc
gagccggtagaggatgacgaactggatagcgttgtccctgtcgatggtgagttaccgcaa
gaagagtctgatgaaccggaggccgatgacgagacaccggctgatgatgaataa
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