Delphinapterus leucas (beluga whale): 111164461
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Entry
111164461 CDS
T05885
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
dle
Delphinapterus leucas (beluga whale)
Pathway
dle03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111164461 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dle03021
]
111164461 (CPSF3)
03019 Messenger RNA biogenesis [BR:
dle03019
]
111164461 (CPSF3)
Transcription machinery [BR:
dle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111164461 (CPSF3)
Messenger RNA biogenesis [BR:
dle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111164461 (CPSF3)
U7-dependent histone pre-mRNA processing factors
111164461 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
CopK
Motif
Other DBs
NCBI-GeneID:
111164461
NCBI-ProteinID:
XP_022409849
UniProt:
A0A2Y9LJN4
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSILSVTVDGKTANINLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcccgcagaagagagtgaccagctgctgatccgaccccttggagctggg
caagaagtaggaagatcatgtattattctggagttcaaaggaagaaaaataatgttggac
tgtgggatccacccaggcctagaaggaatggatgctcttccttacatcgatttaattgac
ccagctgagattgatctcctactaattagtcatttccatttggatcactgtggagctttg
ccctggtttctacagaagacaagtttcaaaggaagaacattcatgactcatgccacaaaa
gctatttatagatggcttctttcagattatgtcaaagttagtaatatatcagcagacgac
atgctatatactgagacagatttggaagagagcatggacaaaattgaaaccatcaacttt
catgaagtgaaggaagttgcaggaatcaagttttggtgttaccacgcaggccatgtcctg
ggagctgccatgttcatgattgagatcgcgggcgtgaagcttttgtacacaggtgatttc
tcaagacaagaagatagacacttaatggcagctgaaattcctaatattaaacctgatatt
cttatcattgaatctacttacggaacccatatccatgagaagcgagaagagcgagaggca
aggttctgtaacactgttcacgatattgtgaaccgagggggcagaggtctcattcctgtc
tttgctcttggaagggctcaggagcttctcttgattttagatgagtactggcagaatcac
ccagaactccatgatattcccatatactatgcatcgtctttggccaagaagtgtatggcg
gtgtaccagacgtatgtaaacgccatgaatgacaaaatccgcaaacagatcaacatcaac
aatccctttgttttcaaacatattagtaaccttaagagcatggatcattttgatgacatt
ggtcccagtgttgtaatggcctccccaggcatgatgcagagtggcttatccagagagctc
tttgaaagctggtgtactgataagaggaatggcgtcattatagcgggatactgtgtagaa
gggacgcttgccaagcatatcatgtctgaacctgaagaaatcactaccatgtccggacag
aagctaccactgaaaatgtctgtggattacatttctttctctgctcacacagattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggagaa
caaaatgaaatggccagattgaaagcagccctgattcgagaatatgaagataatgatgaa
gttcacatagaggttcataatcctcggaatacagaagcagtgaccttgaacttcaggggg
gaaaaactagccaaggtcatgggctttttagcagacaaaaaaccagaacagggccagcgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctc
tctaattatactgacttggccatgagcactgtaaagcagacccaagccattccatatact
ggtccttttaatttgctttattaccagctacagaaattgacaggtgatgtagaagaatta
gaaattcaagaaaaaccggctttgaaagtgttcaaaaatattactgtaatacaggaacca
ggaatggtggtattagaatggctggcaaacccttccaatgatatgtatgcagatacagta
acaaccgtgatattagaagtccagtcaaacccgaaaataaggaaaggtgcagtacagaag
gtttctaaaaaattagaaatgcacgtttatagcaagaggttggagatcatgctccaggac
atatttggagaagactgtgttagtgtaaaagatggttctatccttagcgtcacagtggac
ggaaaaactgctaacataaacttggagacacggactgtagaatgtgaagaaggaagtgaa
gatgacgagtccctccgagaaatggtggaactggcggcccagagactatatgaggccctc
acgccagttcactaa
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integrated database retrieval system
