Delphinapterus leucas (beluga whale): 111166407
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Entry
111166407 CDS
T05885
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
dle
Delphinapterus leucas (beluga whale)
Pathway
dle04151
PI3K-Akt signaling pathway
dle04510
Focal adhesion
dle04512
ECM-receptor interaction
dle04518
Integrin signaling
dle04611
Platelet activation
dle04820
Cytoskeleton in muscle cells
dle04926
Relaxin signaling pathway
dle04933
AGE-RAGE signaling pathway in diabetic complications
dle04974
Protein digestion and absorption
dle05146
Amoebiasis
dle05165
Human papillomavirus infection
dle05205
Proteoglycans in cancer
dle05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
111166407 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111166407 (COL1A1)
04518 Integrin signaling
111166407 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111166407 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111166407 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
111166407 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
111166407 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
111166407 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
111166407 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
111166407 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
111166407 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
111166407 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
111166407 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dle00536
]
111166407 (COL1A1)
Glycosaminoglycan binding proteins [BR:
dle00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111166407 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
111166407
NCBI-ProteinID:
XP_022413783
UniProt:
A0A2Y9M8V2
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEGQEEDIPPVTCVQNGLRYHDRDVWKPVPCQI
CVCDNGNVLCDDVICDEIKNCPNAKVPAGECCPVCPEGEASPTDQEATGVEGPKGDTGPR
GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGISVPGPM
GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRP
GERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQM
GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGSTGPAGPPGFPGAVGAKGEAGPQGSR
GSEGPQGVRGEPGPPGPAGAAGPAGNPGTDGQPGAKGANGAPGIAGAPGFPGARGPSGPQ
GPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPAGLP
GPPGERGGPGSRGFPGSDGLAGPKGPAGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLT
GSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGSRGQAGVMGFPGPKGAAGEPGKAGERGVP
GPPGAAGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPSGPPGEAGKPGEQ
GVPGDIGAPGPSGARGERGFPGERGVQGPSGPAGPRGSNGAPGNDGAKGDAGAPGAPGNQ
GAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDK
GETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGAP
GTAGPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPSGPA
GKEGSKGPRGETGPAGRAGEVGPPGPPGPAGEKGAPGSDGPAGAPGSPGPQGIAGQRGVV
GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAE
GSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPV
GARGPTGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPR
GPPGSAGTPGKDGLNGLPGPIGPPGPRGRTGDAGPAGPPGPPGPPGPPGPPSGGYDFSFL
PQPPQEKAQDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRD
LKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNSKDK
RHVWYGESMTGGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQT
GNLKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIID
VAPLDVGAPDQEFGIDVGPVCFL
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaaggccaagaagaagacatcccaccagtcacctgc
gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgtgccctgccagatc
tgtgtctgcgacaacggcaacgtgttgtgcgatgacgtgatctgcgacgaaatcaagaac
tgtcccaacgccaaagtccccgcgggcgagtgctgccccgtctgcccggaaggcgaggcg
tcacccacggaccaagaagccactggagtcgagggacccaaaggagacactggcccccga
ggcccaaggggacccgctggcccccctggccgagatggcattcctggacaacctggactt
cccggaccccccggacccccaggacctcccggaccccctggcctcggaggaaactttgct
ccccagatgtcttatggctatgatgagaaatcaacaggaatttctgtgcctggccccatg
ggtccttctggtcctcgtggtctccctggcccccctggcgcacctggtccccaaggtttc
caaggcccccctggtgagcctggcgagcctggagcctcaggtcccatgggtccccgtggt
ccccctggcccccctggcaagaacggagatgatggtgaagctggaaagcctggtcgtcct
ggtgagcgcgggcctcctggacctcagggggcccggggattgcccggaacagctggcctc
cctggaatgaagggacacagaggtttcagtggtttggatggtgccaagggagatgctggt
cctgctggtcccaagggtgagcctggtagccctggtgaaaatggagctcctggtcagatg
ggcccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggtgct
cgtggaaatgatggtgctactggtgctgctggaccccctggttccactggccccgctggt
cctcctggtttccctggtgctgttggtgctaagggtgaagctggtccccaaggatcccga
ggctctgaaggtccccaaggtgtgcgtggcgagcccggcccccctggccctgctggtgcc
gctggccctgctggaaaccctggtactgatggacagcctggtgctaaaggtgccaatggc
gcccctggtattgctggtgctcctggcttcccgggtgcccgaggcccctctggaccccag
ggtcccagcggcccccctggtcccaagggtaacagcggtgaacctggtgctcctggcaac
aaaggagacactggcgccaagggagagcccggccccactggtattcaaggtccccctggc
cctgctggggaagaaggaaagcgaggagcccgaggtgaacccggacctgctggcctgcct
ggaccccctggcgagcgtggtggacccggtagccgcggtttccctggctcagatggtctt
gctggtcccaagggtcccgctggtgaacgtggtgctcctggccctgctggccccaaaggt
tctcccggtgaagctggtcgccccggtgaagctggtctgcctggtgccaagggtctgact
ggaagccctggcagccctggtcctgatggcaaaactggcccccctggtcctgctggtcaa
gatggccgccctggacccccaggccctcctggtagccgtggtcaggccggtgtgatgggt
ttccctgggcctaaaggtgctgctggagaacccggcaaggctggagaacgaggcgttcct
ggaccccccggcgctgctggtcctgctggcaaagacggagaagctggagcccagggacct
cccggacctgctggccctgctggtgagagaggtgaacaaggccctgctggctcccccgga
ttccagggtctccctggcccttctggtcctcctggtgaagcaggcaaacccggtgaacag
ggtgttcctggagacattggtgcccccggcccctctggagcaagaggcgagagaggtttc
cctggcgagcgtggtgtgcaagggccctccggtcctgcaggtccccgtgggtccaacggt
gcccctggcaatgatggtgctaagggcgatgctggtgcccctggagcccctggtaaccag
ggcgcccctggccttcaaggaatgcctggtgaacgaggtgcagcaggtctcccaggccct
aagggtgacagaggcgatgctggtcccaaaggtgctgatggtgctcctggcaaagatggc
gtccgtggtctgactggtcccattggtcctcctggccccgctggtgcccctggtgacaag
ggtgaaactggtcctagcggccctgctggtcccactggagctcgtggtgcccccggagac
cgtggtgagcctggtccccccggccctgctggcttcgctggcccccctggtgctgatggc
caacctggtgctaaaggcgaacctggtgatgctggtgctaaaggcgatgctggtgcccct
ggcactgctggacccactggacctcctggccccattggtaacgttggtgctcccggaccc
aaaggtgctcgtggcagcgctggtccccctggtgctactggtttccctggtgctgctggc
cgagtcggtccccctgggccctctggaaatgctggaccccctggaccttctggtcctgct
ggcaaagaaggcagcaaaggcccccgcggtgagaccggccccgctgggcgtgctggtgaa
gtcggtcctcccggtccccctggccccgctggtgagaaaggagcccctggttctgatgga
cctgctggcgctcccggctcccccggacctcagggcattgctggacagcgtggcgtggtc
ggcctgcctggtcagcgaggagaaagaggcttccctggtcttcctggcccctctggtgaa
cctggcaaacaaggtccttctggagcaagtggtgaacgtggcccccctggtcccatgggc
ccccccggattggctggaccccctggcgagtctggacgtgagggagcccctggtgccgaa
ggatcccctggacgagatggttctccgggccccaagggtgaccgtggtgagaccggccct
gctggaccccctggtgctcctggtgcccctggtgcccctggccccgtcggccctgctggc
aagagcggcgatcgtggcgagactggtcctgctggtcccgctggtcccattggccccgtt
ggtgcccgcggccccaccggaccccaaggcccccgtggtgacaagggtgagacaggcgaa
cagggcgacagaggcattaagggtcaccgtggcttctctggtctccagggtccccctggc
cctcccggctctcctggtgagcaaggtccctccggagcttctggtcctgctggtccccgc
ggtccccctggctccgctggtactcctggcaaagatggactcaacggtctcccaggcccc
atcggtccccctggtcctcgtggtcgcactggtgatgctggtcctgctggtccccccggc
cctcccggaccccctggtccccctggtcctcccagcggtggttacgacttcagcttcctg
ccccagccacctcaagagaaggctcaggatggtggccgctactaccgggctgatgatgcc
aatgtggtccgtgaccgtgacctcgaggtggacaccactctcaagagcctgagccagcag
atcgagaacatccggagccctgaaggcagccgcaagaaccctgcccgcacctgccgtgac
ctcaagatgtgccactccgactggaagagcggagaatactggattgaccccaaccaaggc
tgcaacctggatgccatcaaggtcttctgcaacatggagacaggcgagacctgcgtgtat
cccactcagcccagcgtggcccagaagaactggtacatcagcaagaactccaaggacaag
aggcatgtctggtacggcgagagcatgaccggcggattccagttcgagtacggcggccag
ggctccgatcccgccgatgtggccatccagctgactttcctgcggctgatgtccactgag
gcctcccagaacatcacctaccactgcaagaacagcgtggcctatatggaccagcagact
ggcaacctcaagaaggccctgctcctccagggctccaacgagattgagatccgggccgag
ggcaacagccgcttcacctacagcgtcacctacgacggctgcacgagtcacaccggagcc
tggggcaagacagtgatcgaatacaaaaccaccaagacctcccgcttgcccatcatcgat
gtggcccccttggacgttggcgccccagaccaggaattcggcatcgacgttggccctgtc
tgcttcctgtaa
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integrated database retrieval system
