Delphinapterus leucas (beluga whale): 111172001
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Entry
111172001 CDS
T05885
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
dle
Delphinapterus leucas (beluga whale)
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dle03021
]
111172001 (SCAF4)
03041 Spliceosome [BR:
dle03041
]
111172001 (SCAF4)
Transcription machinery [BR:
dle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111172001 (SCAF4)
Spliceosome [BR:
dle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
111172001 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111172001
NCBI-ProteinID:
XP_022423906
UniProt:
A0A2Y9MSK6
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVTENVTNNEGSPPPPVKVSSEPSQATTNSIPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTAPTQP
PEQKAAFPQPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDAAAAATAATAAATTAPAAAV
APPAPAAAVPSVAATAASPPQAPFGFPGDGMQQPAYAQHQNMDQFQPRMMAIQQDPVHHQ
VPLPPNGQMPGFGLLPTPPFPPMAQSVIPPTPPVQQPFQTSFQAQSEPLTQKAHQEMEVE
QPCIQEAKRHMSDNRKSRSRSASRSPKRRRSRSGSRTRRSRHRRSRSRSRDRRRHSPRSR
SQERRDREKERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESI
NMIPPRGCAYIVMVHRQDANRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVEL
GVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKHENEVAQNGGAETSHTEPVSP
IPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPP
PPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPINIPNSTIAGINEDTTK
DLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVIGL
QAPSTGLLGARPGLIPLQRPPGMPPPHLPRFPLMPPRPMPPHMMHRGPPPGPGGFGMPPP
HGMKGPFPPHGPFVRPGGVPGLGGPGPGPGGPEDRDGRQQQQQPPPAPQAQQQPPTQPPQ
PPPAQPQPFRNDNRQQFTSGRDQERFGRRSFGNRVENDRERYGNRNDDRENSNRERREWG
RRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEENRGKEKPEVTDRAGGNKTVE
PPISQVGNVDTVSELDKGESESAVVKPSEELPAEATSSVEPEKDSGSAAEAPR
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaagagctcttttcacttatggatatgaagcctccc
atctctcgagccaagatgattctcatcacgaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtggaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccgggattatatgtaatcgactcaattgtgagacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataactgccacattccaatatttgtat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcagaaaaat
ggagtattcaaaattgaaatcattcaaccgcttttggacatggcagcaggaaccagtaat
gccgccccagtaacagaaaatgttactaataatgaaggttcacctccacctccagttaaa
gtttcttctgaaccctcacaagccactacaaactccataccaactgtaccacagttgccc
agctctgatgcttttgctgctgtggcccaactgtttcagacaactcaaggtcaacagctt
cagcagatccttcagacttttcaacagcctccaaaaccacagtctcccgccattgacaat
gctgtgatggctcaggttcaggctatcacagctcagttaaagacagctcctacacaacca
cctgaacaaaaagctgctttcccccaacctgaacaaaaaactgcatttgacaagaagcta
cttgatagatttgattacgatgatgagccggaagctgtggaagaatcgaagaaagaagat
gctgccgccgccgccactgccgccaccgccgccgccaccacagcacctgctgctgctgtt
gcgccccctgcacctgctgctgctgtaccttctgttgctgcgactgctgcttctcctcca
caggcaccctttggatttcctggagatggcatgcagcaaccagcatatgcccagcaccaa
aacatggatcagtttcaacctcgaatgatggcaatacagcaggatccagtgcaccatcag
gttccacttcctcctaatggacagatgccaggatttggccttcttcctacacctccattt
cctcccatggctcagtccgtgattcctccaactccacccgtgcagcagcctttccaaact
tcctttcaggcacaaagtgaaccacttacacaaaaggcacatcaggaaatggaagtcgaa
caaccttgtattcaagaggctaagcggcacatgtccgataacagaaagtcaagatctaga
tcagcatccaggtcaccaaaaaggagacgatctcgatctggttctagaactcgaaggtct
cgtcatcgacgttctcgatctcggtccagagatagacgccgacattctcctagatctcga
tcccaagaaagaagggatcgggaaaaagaaagagagcgccgacaaaaaggccttcctcaa
atcaaaccagaaactgctagtgtttgtagtactacactctgggtgggacagctggacaaa
aggactactcagcaggatgttgccagtctcttagaagagtttggtccaattgaatcaatt
aatatgattcctcccagaggttgtgcctatattgttatggttcataggcaagatgctaac
cgtgccctgcagaaactgagccgaggaaactataaagtgaaccagaaatccataaagatt
gcctgggccttaaacaaaggaataaaggcagattataagcagtattgggatgtagaactt
ggtgttacttatattccgtgggacaaagtcaagcctgaagaactggagagtttttgtgaa
ggaggaatgttggacagtgatacacttaatccagattggaagggaattcccaaaaagcat
gaaaatgaagttgctcaaaatggaggggcagaaacctcacacacagaaccagtatcaccc
atacctaagcctttacctgtgcctgtccctcctattcctgttcctgcacctataacagta
ccacctccacaggtcccaccacatcagccgggacctcctgtagttggtgctctccagcca
cccactttcacgcctcctttgggaattccccctccaggctttggtcctggtgttcctcct
cctccacctcctccaccatttctgcgcccaggattcaacccaatgcatttaccaccaggt
tttcttcctcctggacccccacctcctataactccaccagtatccattcctcctcctcac
actccaccaataaacatcccaaactctactatcgctggtataaatgaagacactacaaaa
gacttatctattggaaatcccattccaacagtggtgtctggggctagaggaaacgccgag
tctggtgacagtgtgaaaatgtatggttctgctgtgccacctgctgcacccacgaatctg
cccacccctcctgtaacccagcctgtttcacttcttggtacgcaaggagtaattgggctc
caagccccatccactggtcttcttggtgcccgacctggcctgatcccactccagcgcccg
ccaggaatgcctccacctcacctgccacgctttcctttgatgccgcctcgtcccatgcct
ccgcatatgatgcatagaggtccgccaccaggccccgggggcttcgggatgcctccgcct
catggaatgaaaggtccctttcctccccacggcccctttgtccggcccggtggagtgcca
gggctcgggggcccagggccaggcccagggggtcccgaggacagagacggaaggcagcag
cagcagcagccgccgccggcaccacaggcgcagcaacagccaccgacgcagccaccgcag
ccgccgccggcgcagccacagccgtttagaaacgataacaggcagcagttcacttcaggt
agagaccaagaaaggtttggaagaagatcttttggaaatagggtggaaaatgaccgggaa
cggtatgggaaccgtaatgatgatagagagaatagtaatcgtgaaaggagagagtgggga
agaaggagccctgaccgggacaggcacagagacttggaagagaggaatagacgctctagt
gggcatcgagacagagagagagattctagagatagagagtctcgtagagagaaggaggaa
aaccgaggcaaggagaagcctgaggtgacagacagggcaggcggtaacaaaaccgttgaa
cctcccattagccaagtgggaaatgtagacactgtttcagaacttgataagggggagtct
gagtctgcagttgtaaaaccttctgaagagttacctgctgaggctacctcatccgttgaa
cctgaaaaggattctggctcagcagccgaggctcctcgttag
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