KEGG   Delphinapterus leucas (beluga whale): 111175038
Entry
111175038         CDS       T05885                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
dle  Delphinapterus leucas (beluga whale)
Pathway
dle04512  ECM-receptor interaction
dle04514  Cell adhesion molecule (CAM) interaction
dle04820  Cytoskeleton in muscle cells
dle05144  Malaria
dle05205  Proteoglycans in cancer
dle05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:dle00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111175038 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    111175038 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111175038 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    111175038 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    111175038 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    111175038 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dle04131]
    111175038 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:dle04090]
    111175038 (SDC1)
   00535 Proteoglycans [BR:dle00535]
    111175038 (SDC1)
Membrane trafficking [BR:dle04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    111175038 (SDC1)
CD molecules [BR:dle04090]
 Proteins
  111175038 (SDC1)
Proteoglycans [BR:dle00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   111175038 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 111175038
NCBI-ProteinID: XP_022430081
UniProt: A0A2Y9NAX2
LinkDB
Position
Unknown
AA seq 310 aa
MKRPALWLWLCALALRLQPALPQTVAVNVPPEDQDGSGDDSDSFSGSGAGALPDITLSQQ
TPSTWKDKGLLTATPTAPEPSRPGTTVTSTSILPTGEQPEEGGLVLLGKLEPGLTTQEKE
ATHPPSGTTLHPTTHRASTARATTAQGPATSHPHRDVPPDHHETSAPTGHGQLEPQAPSV
EDGASATAEKTAEDEAPTQLPEGEGSGEQDFTFDVSAENSAGATVEPGQRNVPPGDPGAT
GASQGFLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQ
KPSKQEEFYA
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaagcgcccggcgctctggctgtggctctgcgcgctggcgctgcgcctgcagccggcc
ctcccgcaaactgtggctgtaaacgtgccccccgaagatcaggatggctctggagatgac
tccgacagcttctctggctcgggcgcaggcgctctgccagatatcaccttgtcacagcag
accccctccacctggaaggacaaggggctcctgacggccacgcccacggctccagagccc
agccgcccgggtaccacggtcacctccacctccatcctgccgactggagagcagcctgag
gagggggggctggtgctcctaggaaagctggaacctggcctcaccacccaagagaaggag
gccacccacccacccagtgggaccacgctgcacccaaccacccaccgggcatcgacagcc
agagctaccacggcccaggggcctgccacctcccatccccacagggacgtgccgcctgac
caccacgagacctcagctcccacaggtcacggtcagctcgagcctcaggctcccagcgtg
gaggatggagcgtctgctaccgccgagaagactgctgaggatgaagcccccacccagctc
ccagaaggagagggctctggcgagcaggacttcacctttgacgtgtcggcggagaactca
gccggggccactgtggaacctggccagcggaatgtgcccccaggggatcccggggccacg
ggggcctcgcagggcttcctggacaggaaggaagtgctgggaggggtcattgccggaggc
ctcgtgggactcatctttgccgtgtgcctggtgggtttcatgctgtaccggatgaagaag
aaggacgagggtagctactccttggaggagccgaagcaagccaatggcggggcctaccag
aagcccagcaaacaggaggagttctacgcctga

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