KEGG   Delphinapterus leucas (beluga whale): 111175202
Entry
111175202         CDS       T05885                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
dle  Delphinapterus leucas (beluga whale)
Pathway
dle03410  Base excision repair
dle04140  Autophagy - animal
dle04217  Necroptosis
dle04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:dle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111175202 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111175202 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    111175202 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    111175202 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dle03036]
    111175202 (HMGB1)
   03400 DNA repair and recombination proteins [BR:dle03400]
    111175202 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dle04147]
    111175202 (HMGB1)
Chromosome and associated proteins [BR:dle03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    111175202 (HMGB1)
DNA repair and recombination proteins [BR:dle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     111175202 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     111175202 (HMGB1)
Exosome [BR:dle04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   111175202 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 111175202
NCBI-ProteinID: XP_022430292
UniProt: A0A2Y9NLU9
LinkDB
Position
Unknown
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccagatgcttctgtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaagttt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatccct
cctaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggagaacatcctggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgagaagaaggctgctaaactgaaggaaaagtacgaaaaggatattgct
gcataccgagctaaagggaagcctgatgcagcaaaaaagggagtcgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggag
gaggatgaagaggatgaagaggaagaagaagatgatgatgatgaataa

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