Delphinapterus leucas (beluga whale): 111178108
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Entry
111178108 CDS
T05885
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
dle
Delphinapterus leucas (beluga whale)
Pathway
dle04820
Cytoskeleton in muscle cells
dle05169
Epstein-Barr virus infection
dle05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111178108 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
111178108 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
111178108 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dle03019
]
111178108 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dle04812
]
111178108 (VIM)
04147 Exosome [BR:
dle04147
]
111178108 (VIM)
Messenger RNA biogenesis [BR:
dle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
111178108 (VIM)
Cytoskeleton proteins [BR:
dle04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
111178108 (VIM)
Exosome [BR:
dle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111178108 (VIM)
Exosomal proteins of other cancer cells
111178108 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
RBD-FIP
TPR_MLP1_2
Sec10_N
DUF573
Laminin_II
DUF4515
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
111178108
NCBI-ProteinID:
XP_022436316
UniProt:
A0A2Y9NTL3
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MSSRSVSSSSYRRMFGGPGTASRPSSSRSYVTTATRTYNLGSALRPGTSRSLYASSPGGV
YATRSAAMRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLSE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcacc
gcgagccggccgagctccagccggagctacgtgaccacggccacccgcacctacaacctg
ggcagcgcgctgcgccccggcaccagccgcagcctctacgcctcgtccccgggcggcgtg
tacgccacgcgctccgcggccatgcgcctgcggagcagcgtgcccggcgtgcgcctgctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctgaacgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggc
cagggcaagtcgcgcttgggggacctctacgaggaggagatgcgagagctgcgccggcag
gtggaccagctcaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctgtccgag
gacatcatgcgtctccgggagaagttgcaggaggagatgcttcagagggaggaagccgag
agcaccctgcagtctttcagacaggatgttgacaatgcttcattggcacgtctggacctg
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactacatgatgag
gaaatccaggagctgcaggcccagattcaagaacagcacgtccagatcgatatggatgtt
tccaagcccgacctcacggctgccctgcgtgacgtccgccagcagtacgagagcgtggcc
gccaagaacctccaggaggctgaggaatggtacaagtccaagttcgctgacctctccgag
gctgctaaccgcaacaacgatgccctgcgccaggccaagcaggagtcgaacgagtaccgt
cggcaggtgcagtccctcacctgcgaggtggatgccctcaaaggcaccaacgagtctctg
gaacgccagatgcgtgaaatggaagagaactttgccgtggaagctgctaactaccaagac
actattggccgcctgcaggacgagattcagaacatgaaggaagagatggctcgtcacctg
cgtgaataccaagatctgttgaatgttaagatggctctcgacatcgagattgccacctac
aggaagctgctggaaggagaggagagcaggattgctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggattcactccctctggttgacacccattcaaaaagg
acacttctgattaagacggttgaaaccagagatggacaggttatcaacgaaacttcccag
catcacgatgatctggaataa
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