Delphinapterus leucas (beluga whale): 111180377
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Entry
111180377 CDS
T05885
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
dle
Delphinapterus leucas (beluga whale)
Pathway
dle03015
mRNA surveillance pathway
dle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111180377 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
111180377 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dle03019
]
111180377 (PABPC1)
03041 Spliceosome [BR:
dle03041
]
111180377 (PABPC1)
Messenger RNA biogenesis [BR:
dle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111180377 (PABPC1)
mRNA cycle factors
Stress granule specific factors
111180377 (PABPC1)
Spliceosome [BR:
dle03041
]
Complex C
Other components
Complex C specific factors
111180377 (PABPC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_MUD2_C
RRM_5
RRM_10
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
111180377
NCBI-ProteinID:
XP_022440388
UniProt:
A0A2Y9PD08
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccccatggcctcgctctacgtgggggacctacacccc
gacgtgaccgaggcgatgctctatgagaagttcagcccggccgggcccatcctctccatc
cgggtctgcagggacatgatcacccgccgctccttgggctacgcgtatgtgaacttccag
cagccggcagacgcggagcgtgctttggacaccatgaattttgatgttataaagggcaag
ccagtacgcattatgtggtctcagcgtgatccatcacttcgcaaaagtggagtgggcaac
atattcattaaaaatttggacaaatccattgataataaagcactgtatgatacattttct
gcttttggtaacatcctttcatgtaaggtggtttgtgatgaaaatggttccaagggttat
ggatttgtgcattttgagacacaagaagcagctgaaagagctattgaaaaaatgaatggg
atgcttctaaatgatcgcaaagtatttgttggacgatttaagtctcgtaaggaacgagaa
gcagaactcggagctagggcaaaagagttcaccaatgtttacatcaagaattttggagaa
gacatggatgatgagcgccttaaggatctctttggcaagtttggacctgccttaagtgtg
aaagtaatgactgatgagagtggaaaatccaaaggttttggatttgtaagctttgaaagg
catgaagatgcacagaaagctgtggatgagatgaacggaaaggagctcaatggaaaacaa
atttacgttggtcgagcccagaaaaaagtggaaagacagacggaacttaagcgcaaattt
gaacagatgaagcaagataggatcaccagataccagggtgttaacctttatgtgaaaaat
ctcgatgatggtattgatgatgaacgtctccggaaagagttttctccgttcggtacaatc
actagtgcaaaggttatgatggagggtggtcgcagcaaagggtttggatttgtgtgtttc
tcctccccagaagaagccactaaagcagttacagaaatgaatggtagaattgtggccacc
aagccattgtatgtagctttagctcagcgcaaagaagagcgccaggctcacctcactaac
cagtatatgcagagaatggcaagtgtaagagctgtgcccaaccctgtaatcaacccctac
cagccagcacctccttcaggttacttcatggcagctatcccacagactcagaaccgtgct
gcatactatcctcctagccaaattgctcaactaagaccaagtcctcgctggactgctcag
ggtgccagacctcatccattccaaaatatgcccggtgctatccgcccagccgctcctaga
ccaccatttagtactatgagaccagcgtcttcacaggttccgcgagtcatgtcgacacag
cgtgttgctaacacatcaacacagacaatgggtccccgtcctgcagctgctgcagctgca
gctactcctgctgttcgcaccgttccacagtataaatacgctgcgggagttcgcaatcct
caacaacatcttaacgcacagccacaagttaccatgcagcagcctgctgttcatgtacaa
ggtcaggaacctttgactgcttccatgttggcatctgcccctcctcaagaacagaagcaa
atgttgggtgaacggctctttcctctaattcaagccatgcaccctactcttgctggtaaa
atcactggcatgttgttggagattgataattcagaacttcttcatatgcttgagtctcca
gagtctctccgttctaaagttgatgaagctgtagctgtactacaagcccaccaagcaaaa
gaggctgcccagaaagcagttaacagtgccactggggttccaactgtttaa
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