Delphinapterus leucas (beluga whale): 111180721
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Entry
111180721 CDS
T05885
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
dle
Delphinapterus leucas (beluga whale)
Pathway
dle03015
mRNA surveillance pathway
dle04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111180721 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111180721 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dle03021
]
111180721 (SYMPK)
03019 Messenger RNA biogenesis [BR:
dle03019
]
111180721 (SYMPK)
Transcription machinery [BR:
dle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111180721 (SYMPK)
Messenger RNA biogenesis [BR:
dle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111180721 (SYMPK)
U7-dependent histone pre-mRNA processing factors
111180721 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
111180721
NCBI-ProteinID:
XP_022441028
UniProt:
A0A2Y9PEI8
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQTEIARNMPSSKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSATSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNTYLAAGATGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSSKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPETKEAPAGPLEEDDLEPLALAPPPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSLSSARPGPPQPEEAIDFREEGPECETP
AIFISMDDDSGLTEAALLDSSLEGPLPKEAAAGGLISKEERSPQTLTLAGEDTVKTPSPT
AEEAGEPETKGNS
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcagtggggatagcgtcactcgccggagcgtggcatcacagtttttcaca
caagaggaggggccgggcattgatggcatgaccacatcagagagagtggtggatctcctc
aaccaggcagcactgatcaccaatgattcaaagatcacagtgctcaaacaggtccaggag
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc
caagcagacaagtccattgaagtgcgcaagtttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttactgctgaaactgatcgcgaatctcaacatgctcttgagagat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagcgagctccaggaagcctgctgggatatg
gtgtctgccatggctggggacatcatcctgctgttggactctgacaatgacggcatccgt
acccacgccatcaagtttgtggagggcctcattgtcaccctgtcgccccgcatggccgac
tcggaggtgccccgacgccaggagcacgacatcagcctggaccgcatccctcgtgaccat
ccctatatccaatacaatgtgctgtgggaagaaggcaaggcagccttagagcagttgctc
aagttcatggtgcaccccgctatctcctccatcaacctgaccacagccctgggctccctc
gctaatattgcccgccagaggcccatgttcatgtctgaggtgattcaggcctatgaaacc
ctgcacgccaacctgcccccaacgctggccaaatctcaggtgagcagtgtgcgtaagaac
ctcaagttgcacctgttgagtgtgctgaagcacccagcctccttggagttccaggctcaa
atcaccaccctgctggtagacctgggcacacctcagactgagatcgcccgcaacatgccc
agcagcaaggatgcccgcaagcggccccgagacgactcagattccacgctcaagaagatg
aagcttgagcccaacctgggggaagacgacgaggacaaggacttggagccaggcccctca
gcgacctcgaaggcctcagcccagatctcaggccagtcagacacagatatcacagccgag
ttcctacagcctctgctgacacctgacaatgtggccaatctggtcctcatcagcatggtg
tacctgcctgaggccatgcccgcctccttccaagccatctacaccccagtggagtcagca
ggcactgaagcccagatcaagcacctggctcggctcatggccacacagatgacggccgca
ggactggggccaggcgtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagccggagagtgtcctgatcaagcggcgcctgtcagctcagggtcaggccatc
tcggtagtgggctccctgagctccatgtccactctggaggaggaagcgccccaggccaag
aggaggccagagcccatcatccccgtcacgcagccccggctggcaggcgccggcgggcgc
aaaaaaatcttccgtctgagtgatgtgctgaagcccctgaccgacgcccaggttgaggcc
atgaagctgggcgctgtgaagcggatcctgcgggctgagaaggccgtggcctgcagcggg
gcagcccaggtgcgcataaagatcctggccagcctggtgactcagtttgactcgggcctg
aaggccgaggtcctgtccttcatcctggaagacgtgcgggcccgcctggacctggccttt
gcctggctctaccaggagtacaacacctacctagcagctggtgccacgggcaccctggac
aagtatgaggactgcctcatccgcctgctctccggccttcaggagaagccagaccagaag
gatgggatcttcaccaaggttgtactggaggcgccgctcatcactgagagtgccctggag
gtgattcgcaagtactgtgaggatgagagtcgcacctacctgggcatgtccactcttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgtcctgctagacctc
agctcccatgagaaggacaaggtgcgttcccaggccttgctattcatcaagcgcatgtac
gagaaggaacagctacgagagtatgtggagaagtttgccctcaactacctacagctcttg
gtccaccccaacccgccatctgtgctctttggagccgacaaggacacagaggtggcagcg
ccctggactgaggagacagtaaagcagtgtttgtacctctacctggccctcctgcctcag
aaccacaagctgatccatgagctggcagccgtgtatactgaggccatcgctgacatcaag
aggacagtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcgcccgag
ctgctcctgctggtggaaaactgtcccaagggggcagagacactggtcacacgttgtctg
cacagcctcacggacaaagtcccaccctccccagagctggtgaagcgggtccgggatctc
taccacaagcgactgcccgacgtccgcttcctcatccctgtgctcaatgggctggaaaag
aaggaagtgatccaggccttgccaaagctcatcaaactcaaccccatagtggtgaaggag
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcagccttgtcccccctg
aaccctggagagcttctcatcgcattacacaacatcgactcctcaaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagtcccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctt
tcccgcctcatcatgaaacaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagctcccaccccagcag
ctgggtgccgtctttgacaagtgcccggagctccgggagcccctgctggcccacgtccgt
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agcggcaagcaagagccagagactaaggaagcacctgccgggcccctggaagaggatgac
ttagagcccctggccctggcaccgcccccggccccccgcccccctcaagacctcatcggc
ctgcggctggcccaggagaaggccttaaagcggcagctggaggaggaacagaagctgaag
cctgggggagtgggagccccctcctcgtcctcctcgtcgttgtcctcggcccggccaggc
cctccccagccggaggaagccattgatttccgggaggaggggcctgagtgtgagaccccg
gccatcttcatcagcatggatgatgactcggggctgactgaagctgcactgctggactct
agtcttgagggacccctacctaaggaagctgcagccggcggattgatttcaaaggaagag
cggagcccccagaccctcacccttgccggagaagacaccgtgaagactcccagccccact
gctgaggaagccggggaacccgagaccaaggggaacagctga
DBGET
integrated database retrieval system
