KEGG   Delphinapterus leucas (beluga whale): 111183905
Entry
111183905         CDS       T05885                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
dle  Delphinapterus leucas (beluga whale)
Pathway
dle03040  Spliceosome
dle04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111183905 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111183905 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dle03041]
    111183905 (PRPF19)
   04121 Ubiquitin system [BR:dle04121]
    111183905 (PRPF19)
   03400 DNA repair and recombination proteins [BR:dle03400]
    111183905 (PRPF19)
Enzymes [BR:dle01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111183905 (PRPF19)
Spliceosome [BR:dle03041]
 Complex B
  Other components
   Prp19 complex
    111183905 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    111183905 (PRPF19)
Ubiquitin system [BR:dle04121]
 Ubiquitin ligases (E3)
  U-box type E3
   111183905 (PRPF19)
DNA repair and recombination proteins [BR:dle03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    111183905 (PRPF19)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st Prp19 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR41 Beta-prop_HPS5 U-box Beta-prop_IFT122_1st Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_SPT8 PROPPIN Beta-prop_Nup120_160 Beta-prop_ACSF4 eIF2A Cytochrom_D1 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 RMC1_N zf-Nse Beta-prop_VPS8 Beta-prop_LRRK2 DUF1830 ATG16 Cep57_MT_bd
Other DBs
NCBI-GeneID: 111183905
NCBI-ProteinID: XP_022447580
UniProt: A0A2Y9PPD6
LinkDB
Position
Unknown
AA seq 504 aa
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSAVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtccctgatctgctctatctccaatgaagtaccagagcacccgtgtgtgtcccctgtc
tctaatcacgtctacgagcggcggctcattgagaagtatattgcagagaatggcacggat
cccatcaacaaccagcctctgtccgaggagcagctcattgatatcaaagttgctcaccca
atccggcccaagcctccctcagccaccagcatcccagccattctgaaagccttgcaggac
gaatgggacgcagtcatgctccacagcttcaccctgcgccagcagctgcagaccacccgc
caagagctgtcccacgctctgtaccagcacgatgccgcctgccgtgtcatcgcccgtctc
accaaggaagtcactgctgcccgagaagctctggctaccctgaaaccgcaggctggtctc
atcgtgccccaggctgtgccgagctcccagccgagtgttgtgggtgcaggcgagccgatg
gatttgggcgagctggtgggaatgacccccgagattattcagaagcttcaagacaaggcc
actgtgctaaccacagagcggaagaagagagggaagactgtgcctgaggagctggtgaag
ccggaagagctcagcaaataccggcaggtggcatcccacgtggggttgcacagtgctagc
attcccgggatccttgccctggacctctgcccctccgacaccaacaagatcctcactggt
ggggcagataaaaatgtcgtcgtcttcgacaagagttctgagcaaatcctggccactctc
aaaggccataccaagaaagtcaccagcgtggtctttcacccttcccaggagctggtgttt
tctgcctccccagatgccactatcaggatttggtctgttccgaacgcctcttgtgtacag
gttgttcgggcccatgagagtgctgtgacaggcctcagcctccacgccactggtgactat
ctcctgagctcctctgatgaccagtactgggccttctctgacatccagacaggacgtgtg
ctcaccaaggtgaccgatgaaacttctggctgctccctcacctgtgcgcagttccaccct
gacggactcattttcgggacaggaaccatggactctcagatcaagatctgggacttgaag
gagcgcaccaacgtggccaacttccctggccactcgggccccatcaccagcatcgccttc
tccgagaacggctactacctggctacggcggctgacgactccgctgtcaagctctgggat
ctgcgcaaactgaagaacttcaagacgctgcagctggacaacaactttgaggtaaagtca
ctgatctttgaccagagcggaacttacctggcccttgggggcacggatgtccagatctac
atctgcaaacagtggacggagattcttcactttacagagcatagcggcctgaccacgggg
gtggcctttgggcaccacgccaagttcattgcttcaacaggcatggacaggagcctcaag
ttctacagcctgtag

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