KEGG   Delphinapterus leucas (beluga whale): 111183910
Entry
111183910         CDS       T05885                                 
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
dle  Delphinapterus leucas (beluga whale)
Pathway
dle03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dle00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111183910 (PATL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dle03019]
    111183910 (PATL1)
Messenger RNA biogenesis [BR:dle03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111183910 (PATL1)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     111183910 (PATL1)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 111183910
NCBI-ProteinID: XP_022447592
UniProt: A0A2Y9PW83
LinkDB
Position
Unknown
AA seq 771 aa
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPRPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDVSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFNQQVLCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPAPATPPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMV
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGDGPKKERTKLITPQVAKLEHAYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDY
ERRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQL
MNLPQSAAAPAPSNPHLTAVLQNKFGLSLLLVVLSRGEDLQGSDPTSESTQSNQWTEVMF
VATRELLRIPQAALAKPVSIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggcctgggagaggaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagaaaagctg
cctgtggcggttaatgaacaaacaggcaatggagaaagggatgagatggacttgctgggt
gatcacgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagctatcatgagggcagtacagaccaggccagtgttgcaaccccgaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtgttagaatatgccttgcctcagaggcccccacag
ggcccagaagatgatcgggacgtttctgagcgtgcattaccgaggcggtcaacttcgcct
gtcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtacccagcttcaaccaacaggttctgtgtccgaagcctgtccatgttcgacccccaatg
ccaccacgctatcctgctccctacggtgagaggatgtctcccaaccagctctgcagtgtc
ccgaactcttccctactgggtcaccctttccctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccacttgctgccatgaatcccaagttg
ctgcaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccagcccctgctacaccgcctcctcctcagcagcaccctcctggcccagggcctcac
ctgcaaaacctaagatcacaggccccaatgtttagaccagatacaacccaccttcatcca
cagcaccgtcgactcttgcatcagagacagcaacagaataggaatcagcatcggaatctc
aatggtgcaggagatagaggaagtcaccggagcagtcatcaggatcatctccgaaaggat
ccatacgccaatctcatgttgcagcgagaaaaagattgggtctctaaaatccagatggtg
cagctgcaaagcactgatccctacctggatgatttttattaccagaattattttgaaaaa
ctggagaaactgtcagctgctgaagaagtgcaaggtgatggcccaaaaaaggagcgcacc
aagctcattacccctcaggtggccaaactggagcacgcctataagccagtgcagtttgag
ggctctttgggaaagcttactgtctctagtgtgaataatccccgaaaaatgattgatgct
gttgtgacatctcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaaaaga
cgaaaaacccttgtcataattgagaagacctatagtttactccttgacgtggaggattat
gaaaggcgttacctcctaagtctggaagaagagcgacctgccctgatggatgaaagaaag
cacaaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaggagaggccc
agtgatgaccactttgtacagatcatgtgcatcagaaaagggaagagaatggttgcccgt
attcttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaac
ctccctttccttatcaagaaggatgcacaagatgaggtgctgccatgcttattgagtccc
ttctctcttctcctctatcatcttccatcagtgactgtcaccagccttctgcaacagcta
atgaacctacctcagagtgcagctgcaccagcaccctccaatcctcacctcactgctgtg
ctccagaacaagttcggcctgtcactgctcctcgtcgtgctgagccggggggaagacctg
cagggctcagaccccacttcagaatcaacgcagagcaaccagtggacggaggtgatgttc
gtggcaacccgagaacttctgcggattccccaggcagccctggccaagccagtctctata
cccacaaatctagtatccctgttttctcgttacgttgaccgacagaaactgaacttgctg
gagacaaaactgcagctagttcaggggatacgataa

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