Delphinapterus leucas (beluga whale): 111184925
Help
Entry
111184925 CDS
T05885
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
dle
Delphinapterus leucas (beluga whale)
Pathway
dle03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111184925 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dle03021
]
111184925 (PCF11)
03019 Messenger RNA biogenesis [BR:
dle03019
]
111184925 (PCF11)
Transcription machinery [BR:
dle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111184925 (PCF11)
Messenger RNA biogenesis [BR:
dle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111184925 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
111184925
NCBI-ProteinID:
XP_022449658
UniProt:
A0A2Y9Q2T2
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MSEQTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEESSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGTAQSKLHVSQIPPMAVKSPHQVPVQPEKSRPGPSLQIQDMKGTNRDPRLN
RLSQHSSHGKDQSHRKEFLMNTLSQSDIKTSKTVPSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKLSHTKDLKSQESESARVSDMSKRDPRLKRHLQDKTDSKDDDL
KEKRKTAEKKDKDEHMKSSEHRLVGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGVKQSHMEEFTPPSR
EERNTKRSTKQDVRDPRRIKKTEEERPQESANQHSTKSGTEPKENVENWQSSKSTKRWKS
GWEENKSLQQGDEHSKAPHLRHRESWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLTDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLYDGPSRPSVARDGPTKMI
FEGPNKLSPRIDGPPTPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPSLRFEGSAGGLRFEGPGSQPVGSLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPSGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGMRFEGQHNQLGGNVRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQP
GPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFN
QSGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYF
DEKNLQSSQFGNFGNLPAPITVGNIQASQQVLTGVAQPVAFGQGQQFLPVHPQNPGAFVQ
NPSGVLPKGYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVAAQPPAEEEEDQ
NEDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQN
RTEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEF
QSVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFD
CTPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATATEIKTEN
DTVESV
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtactgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcactcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccctcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaatgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acctgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattcg
ttagatcctgcttggcctattaaacctctgccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcccgaagagtcttcaacacctggcacagtggtc
agttcccctagcatctccactcctccaattgttccggatatacaaaagaatcttacccaa
gagcaactaataaggcagcagttactggcaaaacaaaagcagttgttagaacttcagcag
aaaaagctggagcttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggagacatccaacttaggtcctggaactgcacaatccaaattacatgtttcacaa
attccccctatggcagttaaatctccccatcaggttcctgtgcaacctgagaaaagtcgt
ccaggtccatccttacaaattcaggatatgaaaggaactaaccgggatccccgtcttaat
aggttgagtcaacattcttctcatggaaaagatcagagtcacaggaaggaattcctaatg
aacacattgagccagtctgatattaagacaagtaaaactgtaccctctgaaaaactaaat
tcatccaagcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccaa
ttagattctaaatccaaatctaaatctaaatcaccatcacctttgaaaaacaaattatcc
cacacaaaagacttgaaaagtcaagaatctgaaagtgcaagggtgtctgatatgagcaag
agagatccaagattaaaaagacatcttcaggataagactgatagcaaagatgatgatcta
aaagagaagagaaaaactgcagaaaaaaaggataaagatgagcacatgaaatcatctgaa
cacagactggtgggaagtagaaataaaatcataaatggcattgtacaaaaacaggatacc
ataacggaagaatcagaaaaacaggggacaaaaccagggagatcgagtactagaaagcga
tcaagatcacgatcacccaagtcccggtcaccgattatacattctcccaagagaagagat
aggcggtcacccaaacgaaggcaaaggagtatgtctccaacctcaacacccaaagctggg
aagattcgccagtcaggagttaagcagtcacatatggaagagtttacaccaccttccagg
gaagaaagaaatacgaagcgaagtactaaacaggatgttcgagatccaaggcgaataaaa
aagactgaagaggaacgaccacaagagtctgcaaatcagcattccaccaagtcaggaact
gaaccaaaggaaaatgtagaaaattggcaaagttccaagtctaccaaaagatggaaatct
ggttgggaagaaaataaaagtttacaacagggtgatgaacatagcaaagctcctcatcta
aggcatagggagagctggtcaagcactaaaggaatcttgtcacctcgagctccaaaacag
cagcatcgattaagcgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
ctcttaactgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtacgagaagagcagagatcaccattcaatgat
cgttttccacttaagcgacctagatatgaagattcagataaaccatttgtagatagccca
gcatcaagattcgccggccttgatacaaatcagcgacttacggctttagctgaagataga
ccattatacgatggacctagcaggccatcagtagcgagagatggcccaaccaagatgatt
tttgaaggacctaataagttaagccctagaattgatggacctcctacgccaggttctctt
cggtttgatgggtcaccaggacaaatggggggaggtggccctttgagatttgaaggacca
caaggccagttaggaggtgggtgtcctttgagatttgaaggtcctccgggaccagtaggg
acacctctgcggtttgaggggccaattggtcaagcaggaggaggtggttttcggtttgaa
ggttcccccagtctgaggtttgagggatctgcaggcggtttgcgatttgaaggaccaggg
tcccagcctgtgggtagtctcaggtttgagggacaccggggtcaacctgtgggtggtctg
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatccccggggt
cagcctgtaggtggacttagatttgagggaggtcatggtccatcaggggctgcaattagg
tttgatggacctcatggtcagccatcaggtgggatcagatttgagggcccattgctacag
cagggagttgggatgagatttgagggcccccatggtcagtcagtagctggtatgagattt
gaaggacaacataatcagcttggtgggaacgttaggtttgagggtccacacggtcagcca
ggggttgggatcaggtttgaaggacctttagtccaacaaggaggtggaatgaggtttgag
ggtccttctgtaccaggaggcggcctgagaatcgaaggacctctgggtcaaggtggtcca
agatttgaaggttgtcatgctttaaggtttgatgggcaaccaggtcagccatcactcttg
ccaagatttgatggattacatggtcagccaggtcctagatttgaaagaactggtcagcca
ggcccgcagagatttgatggaccacctggacagcaggttcaaccaagatttgatggtgta
cctcaaagatttgatggtccacaacaccagcaagcatcaaggtttgatattcctcttggt
cttcaaggcacacgatttgacaatcatccttcacaaaggcttgaatcggtatctttcaat
cagagtggcccatataatgatccacctggcaatgcttttaatgccccatcccaaggactg
cagttccaaagacatgaacaaatatttgattcacctcaaggaccaaattttaatggacca
catggccctggaaaccagagtttctcgaatccccttaacagagcttctggacactatttt
gatgagaagaatcttcagagctctcagtttggaaactttggcaatttacctgctccaata
acagtaggaaatattcaggcatctcagcaggttctgactggtgttgctcagccagtagca
tttggccaaggacaacaatttttgccagttcatccacaaaatcctggagcatttgttcag
aatccttcaggtgtccttcctaagggatatcctgataatcatctcagtcaggtggatgta
aatgaattgttttcaaaactgctaaaaacagggattctcaaattgtcccagcctgattca
gctacaacacaagtaaatgaggttgctgctcagccccctgctgaggaggaagaagatcaa
aatgaagatcaagacgttccagatcttaccaattttacaattgaagaattgaaacaacgt
tatgatagtgttataaatcgactgtatactggtattcagtgttactcttgtggaatgagg
tttacaacatcacagacagatgtatatgcagatcacttggactggcattatcgacaaaat
agaactgaaaaagatgtaagcagaaaagtcactcatagacgttggtactacagtttaaca
gactggatagaatttgaggaaatagctgatctggaagaacgtgcaaagagccagtttttt
gaaaaggtgcacgaagaagtcgtgctcaaaactcaggaggctgctaaagaaaaggagttc
caaagtgtacctgctggaccagcaggagcagttgagagttgtgaaatttgtcaagaacaa
tttgaacagtactgggatgaagaagaggaggagtggcatttaaaaaatgctattagagta
gatggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgat
tgtacaccatctcccagcaagacaccagttgaaaatcccttgaacattatgttgaacatt
gttaaaaacgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacggattgat
actccaccagcttgtacagaggaaagcatagcaacagccactgaaattaaaacagaaaat
gacacagtcgagtcagtttaa
DBGET
integrated database retrieval system
