Delphinapterus leucas (beluga whale): 111186687
Help
Entry
111186687 CDS
T05885
Symbol
COL20A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
dle
Delphinapterus leucas (beluga whale)
Pathway
dle04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
111186687 (COL20A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
111186687
NCBI-ProteinID:
XP_022453221
UniProt:
A0A2Y9Q6Q5
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MVCQPGSKRHSGGPGVRRGSSPGLVGCTAGGLQVSTGPDKGVQSVLTLLFPRWNPSLLGS
GLRDPALALKASGALRSCRFWSRRPCPGGRVQLEPHTMSIRVCPRLGVGLWLWLGVTLGL
GQGQASGRLRLVVLPEDRLQMKWRESEGSSLGYLVQVKPRAGDLEQEVMLTTKTPKATVG
GLSPSKGYTLQIFELTGSGNVLLARREFVIKDLKSSSASRSSRRPLGAALQPSPSHEGSP
DLDPPVALAPSQDLPTPAGPQFRCTSPTPVDMIFLVDGSWSIGXSHFQQVKDFLASIIEP
FEIGPDKVQVGSLTQYSGDPQTEWDLNAFGTKEEVLAAVRGLQYRGGNTFTGLALTHVLE
QNLKPVAGLRPEAAKLVILVTDGKSQDDACTAGHMLKDLGVDAFAVGVTDANDAELRLLA
SQRPDITVHSVQDFXPLGSLAGLLSRLVCQKVQGRRLRSGPVTPAAAAPALDPPSAPTGL
VLTQVTSSSIHLSWTPAPRPPLKYLIVLRPSKGGAPREVVLEAPASSAELRNLTSSTEYL
VSVLPVYKAGVGEGLQGPVTTVPLPPPQALTLAAVMPRAIHLTWQPSAGATQYLVQCSPT
SPKGKEEGREVRVGQPEALLDGLAPGRDYEVWVRSLRGAETSEAQSTRARTPALAPPRHL
SFSDVSHDSARVSWEGTARPVRLFRVSYVSSKGGHSGQTEAPGSATSVTLGPLSSSTVYT
VRVTCLYPGGSSSTLTGRLTTRKVPSPSQLSVIELPGDEVQLEWAAAAASGVLVYQITWT
PLGEGKAHKISVPGNLGTAVLPGLGRHSEYKIIILAYYRDGARSPPAPCSPAVSWSPPSN
LALASESPDSLRVSWTPPSGRVLHYQLSYALASGSGPEKSISIPGPRSHVTLPELLAATK
YRVLVSAVYGAGKSVAVSATGRTACPALHPDGSLPGFDLMAAFGLVEKEYASIRGMAMEP
SAFGPIRTFTLFKDAQLTRRASDIHLATLPTEHTVVFLLRLLPETPREVFALWQVAAEDF
RPVLGVLLDASRKSLTYFRSDPSATLQEATFDLPDVRRIFFGSFHKVHIAVGRSKVRLYV
DCRKVAEKPTGEAGSLPTTDFVTLGRLAKARGPRSSSASFQLQMLQIVCSDSWAEEDRCC
ELPASKDGETCPAFPSACACSSQTPGPPGPQGPPGHPGRDGAPGEQGFPAPRGGPGPPGQ
MGPEGPGGQQGSPGTQGQTIQGPVGPPGVKGEKGDHGRPGLQGHPGLQGTPGKVGVQGPK
GMRGLEGTAGLLGPPGPRGFQGTAGARGSSGERGPPGAVGPTGLPGPKGERGEKGEPQSL
ATIYQLVGQACESAIQTYLLKLHACTHESTRPPMPILEAPRAFGTRREARLPGEGGHGGP
RPEDRGRSPCCPE
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtctgccagcccgggtccaagaggcactcaggagggccaggtgtgaggcgtgggtcc
tcaccagggctggtgggctgcactgcaggcggccttcaggtcagcaccgggccggacaag
ggggtgcagtctgtcctgacactcttgtttccacgctggaaccccagcctgttgggatcg
ggactccgggatcctgccctggccctgaaggcttcgggggcacttcgttcctgtcgattc
tggtccaggaggccctgccctggaggccgtgttcagctggagccacacaccatgagcatc
cgtgtgtgcccccgcctcggggtcggcctctggctgtggctgggtgtcaccctaggactc
ggccagggacaagcaagcggccgcctgaggctggtggtgctgcctgaggaccggctgcag
atgaagtggagggagtcggaggggagcagcctcggctacctggtgcaggtgaagcccagg
gcaggggacctggagcaggaggtgatgctgactaccaagacccccaaggccacggtgggg
ggcctcagcccctccaaagggtacaccttgcagatcttcgagctcacaggctcagggaat
gtcctgctggctcggagggagtttgtgatcaaagatttgaagagtagctctgcgagcagg
agcagccggaggccactgggggcagccctgcagcccagcccctcccacgaggggagccca
gacctcgatcccccagtggccttggccccaagccaagacctgcccacgcctgccggaccc
cagttccgctgcacgtcccccacacccgtggacatgatcttcctggtggatggatcctgg
agtattggtnncagtcacttccagcaggtcaaagacttcctggccagcatcattgagccc
tttgaaatcgggccagacaaagtccaagtaggtagcctgactcagtacagcggggacccc
cagaccgagtgggacctgaatgcctttggcaccaaggaggaggtgctggccgccgtgcgt
ggcctccagtacagagggggaaacacgttcacaggcctggccctgacccacgtgctggaa
cagaacctgaagcccgtggcgggtctccgtccggaggcggccaagctggtgattctggtg
acggacggcaagtcccaggacgatgcctgcactgctggccacatgctcaaggatctgggc
gtcgacgcctttgccgtgggcgtgacggacgccaatgatgctgagctgaggctcctggcg
tcccagcgtccggacatcaccgtgcacagcgtgcaggacttcnccccgctcggctcgctg
gccggcctgctcagccgcctcgtctgccagaaggtgcagggcaggcgcctgcgcagcggc
ccagttacaccggccgcagccgctccggccctggaccccccttccgctcccaccggcctg
gtcctgacccaggtgacctcctccagcatccacctctcctggaccccagccccgcggcca
cccctcaagtacctgatcgtgttgcggccttctaagggcggcgcccccagggaggtggtg
ttggaggcgcccgcctcgtcggcagagctgcgcaacctgacctccagcacggagtacctg
gtctccgtgctccccgtctacaaggccggcgtcggtgagggcctgcagggcccggtgacc
acagtgcccctgcccccaccccaggcgctgaccctggccgcagtgatgcccagagccatc
cacctcacctggcagccctcggcaggggccacccagtacctggtgcagtgctcgcccacc
tcccccaagggcaaggaggaggggagagaggtgcgggtggggcagcccgaggcgctgctg
gatgggctggccccaggcagggactacgaggtgtgggtgcggagcctgcgaggggcagag
accagcgaggcccagagcacccgcgccaggacccccgccctggccccccccagacacctg
agcttctcggacgtgagccatgactcggcccgagtgtcctgggagggcaccgcgaggcct
gtgcgcctgttcagggtcagctacgtctcgagcaagggcggccactcgggacagacggag
gctcctgggagcgccacctcggtcactctgggccccctctcgtcctccaccgtctacacg
gtccgcgtcacctgcctctaccctgggggcagctcctccacactgactggccgcctgacc
acacggaaagtccccagcccgagccagctgtcggtgatagagctgcctggggacgaagtc
cagctggagtgggcggccgcagcggcgtccggcgtgcttgtctaccagatcacgtggacg
cccctgggagaggggaaggcccataagatctccgtcccggggaacctgggcacggccgtc
ctgcccggcctggggaggcactcggagtataagatcatcatcctggcctactacagggat
ggggcccgcagcccccccgccccttgctcccccgcagtcagctggagcccaccctccaac
ctggccctggcctcagagtctcccgacagcctgcgggtcagctggacgcccccgagtggc
cgtgtcctccactaccagctctcctatgcactggcctcaggctcgggacccgagaagtcg
atctccattccaggacccagaagccatgtgactctccctgaactgctggcggccaccaag
taccgggtcctagtctcagccgtctacggagcagggaagagtgtggcagtgtctgccacg
ggccggacggcctgcccggccctccacccggatggctccctcccaggctttgacctgatg
gcagccttcgggctggtggagaaggaatacgcctccatccgtggcatggccatggagccc
tcggcctttggccccatcaggaccttcacgctcttcaaggatgctcagctgacccgccgg
gccagcgacatccacctggccaccctccccacggaacacacagtcgtcttcctcctgcgc
ctgctccccgagacgccccgcgaggtctttgcgctgtggcaggtggcggccgaagacttc
cggcccgtcctgggggtcctgctggacgccagcagaaagtcgctgacctacttccgcagt
gaccccagcgccaccctgcaggaggccaccttcgacctgcccgacgtgaggaggatattc
tttgggagcttccacaaggtgcatatagccgtgggccgctccaaggtcaggctctacgtg
gactgccggaaggtggctgagaagcccactggggaggccggcagcctgcccaccaccgac
ttcgtcacactggggagactggccaaggcccggggcccccggagcagctcagcctcattc
cagctccagatgctacagattgtgtgcagtgactcctgggcagaggaggacaggtgctgc
gagctcccggcttcgaaggatggagagacctgccctgccttcccttctgcctgtgcatgt
tcctcgcagacccctgggcccccgggcccccaaggacctcctggccaccctgggagggac
ggagccccaggagagcagggcttcccagcgcccaggggagggcccgggccacctggacag
atgggacccgagggtcctggaggtcagcaggggtcaccaggcacccagggccaaaccatc
cagggacctgtgggtccaccaggggtcaaaggagagaagggggaccatggacgccccggc
ttgcagggccaccccggcctccagggcacccctgggaaggttggcgtccagggaccaaag
ggaatgagaggcctggaggggactgctggcctgctcggaccccctggccctaggggcttc
cagggcacggcgggggccagaggcagcagcggggagcgaggacccccgggggctgtgggg
cccacggggctgccggggcccaagggggagcgaggagagaagggcgagccacagtccttg
gccaccatctaccagctcgtgggccaggcctgcgagtccgccatccagacgtacctgctg
aagctccacgcctgcacccacgagagcacccggccccccatgcccatcttggaggccccc
agggccttcggcacgcgcagagaggcccggctccctggagaaggggggcacggtggcccc
cgcccagaggacagaggacggtccccctgctgccccgagtga
DBGET
integrated database retrieval system