Candidatus Dehalogenimonas loeffleri: V8247_01815
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Entry
V8247_01815 CDS
T10610
Name
(GenBank) PAS domain S-box protein
Organism
dlf Candidatus Dehalogenimonas loeffleri
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
PAS_4
PAS
PAS_3
PAS_8
HATPase_c
Response_reg
HisKA
PAS_7
PAS_10
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
WWX25731
LinkDB
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Position
complement(360039..363956)
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AA seq
1305 aa
AA seq
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MKDKDIRQTGGEETDSYYQRLFNSLPMGLMVQDYSAVKPYLDNLVVSGVSDIGSYLEKHP
DELGHCINLVKIIDANDMAVRLFRASDKQSLTASLRRLFADQSVALFAQRLAALMRGESY
ATEIYGRLFNGETGHAQVRVHILPEYQATWERVQITITDITERKAAEEKLQASESKYQSL
FEDSGEAAFMHRPSPEGLPGVFQEVNEAACELLGYSKAELLTLGPRDIVVWEKAGVTPPN
ITKRLETDKKVTMESTYRHKDGHEIPIEVSIHRFDLQGKPAVLTLARDITERKKAQDALL
QAQAQLELMLGQIPCILWSMDKDLRYTTASGLGLQTSGRTPGDLVGKTIFEYSPKFTESS
PFVIALRQALSGQSQVFEQTSVLNKRTFLVYMQPLFNTMSEIGGIVGVSVDITERKQAEE
KLKRSSEELARQNVFIQAIIDNLPIGLAVNNIGDGKATYMNRSFEEIYGWPKEDIVDISS
FFEKVYPDPAYRQTITSQIMADIASGDPGRMVWDGIETTTKSGETRIINAVNIPVVEQGI
MVSTVRDITARVNAEKALRESEEKFRLLAENTEAIPWVYDVVLDQWAYVAPQVKRIIGYE
PEEWTDIKFWTDRIYEEDREWAPLYCDECSKAGKPHTFEYRFIKKNGDLIWLRDVVSVEM
RDGIPVKLRGFMLDITSQKQKEAELSQSRRQFEILFMDSPVSIMVHDKGTGEIVDANTKA
WESYGLTSLEELITHDIFTKAPFSSAEALALIRKSAEEGHQEFEWFSRRADGTGFWEYVN
LTTMVIGGVERVVASSIDITARRQAEQLAVDAVQEWRVTFDSITDMVAIVDADYKIARVN
AAFTRVLNTRPHEVIGRHCYEVIHGRNTPHPSCPHSRTFENNKVEYSVYFDEKLNFWVES
TSSPILGDQGQITGSVHIIKDISDRKRAEEEQHQLRDKAEMSSRLAAVGEMAAGIAHEIN
NPLTGVIGFSELLLTRPDVPEDMKQELTIINEGSQRVKGIVRRMLTFARQSKPEKSSVDI
NELIENTLELRGYVLKTSNIEVVRDFESRLPRVTADAGQLQQVFLNLIVNAEFAMKQAHD
KGILVIKTERIDGHIRISITDDGPGMSAEVKAKLFQPFFTTKEPGEGTGMGLALSFGIIK
EHGGSITVESVEGSGSTFIIELPVATAETAPSAVPVPVAPSPAPAKKGRVLVLDDEPTVG
MLVKTILTGCGYEVTNCLVPAEALEKLRQGGYDLLILDIRMPGMSGIEFVEELRHRWPEL
LSRILFITGDTSDLTTREYLNTHQIPFITKPFEKKELEDKVNALL
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgaaggataaagatatcaggcaaaccggcggggaagagaccgacagttactaccaacgg
ttgtttaacagtcttccgatgggattgatggtccaggattactcagccgttaagccgtat
ctggataatctggtcgtttccggcgtcagtgatatcggttcgtatttggaaaagcatcca
gatgaattaggccactgcatcaacctggtgaaaataattgacgccaatgatatggcggtt
cggcttttccgggcgtctgataagcaatcattaaccgcttccttgagacggcttttcgct
gaccagtcagtcgcattatttgcccaaagattggcggcactgatgcgtggtgaatcctac
gcaacggagatttacggacggctgttcaacggtgaaacgggacatgcgcaggtgagggtg
catatcttgccggagtatcaggcaacgtgggaaagggttcagataaccatcacagatatc
actgaacgcaaggcggcggaagaaaaacttcaggctagtgagtcaaaatatcagtcacta
ttcgaggatagcggtgaggctgccttcatgcaccggccttctccggaaggtttgccgggt
gtatttcaggaggtcaatgaggccgcttgtgagttattgggttattccaaagcagaattg
ttgaccctcggtccaagggacattgtagtttgggaaaaagccggggtaactcctccgaac
atcacgaaaagactggagactgacaagaaagtaaccatggagtccacataccgacacaag
gatgggcatgagattcctattgaggtgagtatccataggtttgatttacagggcaaaccc
gcggtcttaacgcttgcccgcgatatcacagagcgtaagaaagcccaagatgcgctgctt
caggcccaggcccagcttgaactgatgttagggcagataccttgtatcttatggtcaatg
gataaggacttgagatacaccactgcctcaggtcttggattacagacttcaggccgcacc
cctggtgacctagtcggtaagactatttttgaatattcccccaagtttactgagtctagt
ccctttgttatcgccctcagacaagccttaagcggtcaatcccaggtttttgaacagact
tcggtgctgaataaacggacctttctggtatatatgcagccgttgtttaatacaatgtct
gaaattggcgggattgtcggcgtcagtgttgatattacagagcgaaaacaagctgaggaa
aaactgaagcggtcttcggaagagctggcgcgtcaaaatgtgtttattcaagccatcatt
gataatttgcccatcgggctggcggtgaacaatattggtgacggcaaggccacctatatg
aaccgcagctttgaggaaatatacggctggcccaaagaagacattgttgatatcagttcc
ttttttgaaaaggtctatccggacccggcataccggcagactattacttctcaaataatg
gcggatattgccagcggcgacccggggcggatggtttgggacggcatagaaacaaccacc
aaatccggtgaaacgagaatcatcaatgcggttaatattccggtggtggagcagggcatc
atggtgtccactgtccgtgatattacggcaagggtaaacgctgaaaaagcgttgagagaa
tcggaggagaagttcaggctcctggccgaaaacaccgaagctattccctgggtgtatgat
gtcgtccttgaccaatgggcctatgtcgccccgcaggtgaaaaggattatcggctacgaa
ccggaagaatggactgatataaaattctggactgaccgtatctacgaggaggaccgcgag
tgggcgcctttatattgcgacgaatgctccaaagccggcaagccgcacacctttgaatat
cggtttattaagaagaacggcgatttaatctggctgcgtgatgtagtcagtgtagaaatg
cgtgacggcattccggttaaacttcgcggttttatgctggacatcacttcgcagaagcaa
aaagaggcagagctttctcaaagtcggcggcaatttgagattctgtttatggattcgccg
gtttcaataatggtccatgacaagggcaccggggaaatcgttgatgctaacaccaaagcc
tgggagagttacggtttgacctcgctggaggaattaataacccatgatatcttcactaag
gcgcccttttcatctgccgaggccttggccttaatccgcaaatctgccgaggaaggccat
caggaatttgaatggtttagccgtcgggcagatgggacggggttctgggaatatgttaat
ttgactaccatggttattggcggtgtggagcgggtggtggcttcttcaattgacatcact
gcccgacgccaggcagaacagcttgccgttgacgctgtccaggaatggcgggttaccttt
gactccataactgacatggtggcgattgtggatgccgactataagatagcacgggtcaac
gccgcctttaccagggttcttaataccagaccgcatgaagtgattggccggcattgttac
gaagtaattcacggcaggaatacgcctcatccttcatgtcctcacagccgaacttttgaa
aacaacaaagtggaatacagtgtatattttgacgaaaaattgaacttttgggtggagtca
acttcttcgcccattctgggcgaccaaggccaaataaccggttcagtacatatcattaag
gatatcagtgatcgcaagcgggctgaagaagagcagcaccagttgcgggataaagcggag
atgtccagccggttggcagcggtaggtgaaatggccgccggtatcgcccacgaaatcaac
aacccgctgaccggtgttatcggtttctctgaattattactgaccaggcctgatgtgcct
gaggatatgaaacaagagctgaccatcatcaacgaaggcagccagcgggttaaaggcatt
gtcaggcgcatgctcacttttgcccgccagtccaagccggaaaagagttccgttgatatc
aatgaacttattgaaaataccctggaactccggggctatgtcctcaagaccagtaatatt
gaggtggtcagggactttgaatcccggttgccccgggtaactgcggatgccggccagttg
caacaggtgtttcttaatcttattgttaacgctgaatttgccatgaagcaggcgcacgat
aagggtattttagtcataaagactgagaggattgacgggcatatccggatttcaattacg
gacgacggccccggcatgtccgctgaggttaaggccaagcttttccagccgttttttacc
accaaagagcctggcgagggcactgggatgggcttggcattgtcgttcggcattatcaag
gagcacggcggcagcatcaccgtggagagcgtggaaggttcgggctccacatttatcatt
gagttaccagttgcgacggcggaaacagccccgtctgcagtaccggtaccggttgctccg
tcgcctgcaccggctaaaaaaggcagagttttggtgttggatgacgagccgacggtaggg
atgttggtcaagactattttgaccggctgtgggtatgaggtaaccaattgcctggtcccg
gcggaagctctggaaaagctgcggcaaggcggctatgatttgctgattttagacatccgg
atgccggggatgagcggtattgagtttgttgaagagcttcggcaccgttggccggaattg
ctgagccgtattttatttattaccggggacacttctgacctgacgaccagagaatattta
aacactcatcagattccctttatcaccaaaccgtttgaaaaaaaagaactggaagataag
gttaatgcgttgttatga
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