KEGG   Candidatus Dehalogenimonas loeffleri: V8247_05085
Entry
V8247_05085       CDS       T10610                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
dlf  Candidatus Dehalogenimonas loeffleri
Pathway
dlf03030  DNA replication
dlf03410  Base excision repair
dlf03420  Nucleotide excision repair
dlf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dlf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V8247_05085 (polA)
   03410 Base excision repair
    V8247_05085 (polA)
   03420 Nucleotide excision repair
    V8247_05085 (polA)
   03440 Homologous recombination
    V8247_05085 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dlf03032]
    V8247_05085 (polA)
   03400 DNA repair and recombination proteins [BR:dlf03400]
    V8247_05085 (polA)
Enzymes [BR:dlf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V8247_05085 (polA)
DNA replication proteins [BR:dlf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     V8247_05085 (polA)
DNA repair and recombination proteins [BR:dlf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     V8247_05085 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     V8247_05085 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: WWX24644
UniProt: A0ABZ2J5X8
LinkDB
Position
983279..986011
AA seq 910 aa
MNTPLLVIFDASALVHRAFHAFKYSRQLTVSKTGEVTSAVFGFTNILLKVLADLKPDYYA
IAFDRKGPTFRHELSDKYKAHRPETAPELIAQLGRVRQMVEAFDIPIFEQQGYEADDLIG
TLAGCAVRAGTRVIIVTGDADAMQLVNDDIKVLYPKPGGTFSDTRLFDAEAVNEKFGVPP
SLVAAYKALVGDTSDNIKGVPGIGQKTAVRLLNDYDGIDAIYENIELIRPEKLRETLRRE
ESAARQSLTLSTIVTDLPVDFKLEQCHAGRFNREKVVPLLRELEFTSLINRLPQPPSASA
SAEVPSVLPPPEIDCRYQLVDTPEQLAALAARLTEAGRFALDTETTGLDTMTAELVGLSV
APATGEGYYLPVGHLEAVGRQWLISELSTALDPVLADPNIKKIAHNAKYDLQILRRAGFT
VAGLDFDTMLAAHLLGEKSLSLKGLAFSRLGVEMTPITALIGEGKRQICISRCDLKETAD
YACADADMTFRLYELLAPELERENQSRLFHEVEMPLVPVIMDMESAGITLDTGLLKGMSG
RLAAQLEKIETGIYELAGHPFNIASPKQLGAVLFDELHLPTGRKTHTGYCTDAAVLDELK
DQHEIVRLILEYRTLAKLKSTYVDTLPVMVAAEDGRLHTSFNQARTATGRLSSSEPNLQN
IPVRGELGREIRRAFTAPPGHLLLAADYSQIDLRALAHLSGDRELINAFQNDDDIHTATA
MRLYGLPQAEITPDMRRFAKTVNFGVIYGMSGYGLEQATELTREESTRFITTYFERYPGV
RAYLDATKGQARARGYVETILGRRRYIPDINAANRQVREAAERMAINMPVQGTSADIIKV
AMLDVRREMARQKLQSRLLLQVHDELIFEVPQQEMFFMSELAPRLMAEAVKLDVPLKVDL
KYGANWGEME
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgaatacgccgcttcttgtcatctttgatgcctctgcactggtccaccgtgcctttcat
gctttcaagtatagccggcagttaactgtcagtaaaaccggcgaggttaccagtgctgtt
tttggttttaccaatatcctgctcaaggtacttgctgacctcaagcccgattattacgct
attgcctttgaccgcaaggggccgacctttcggcatgagttatcggataaatacaaagct
caccggccggagaccgcgccggagctgatcgcgcaactgggccgggtgcggcaaatggtg
gaggcctttgatattccgatatttgaacagcagggctatgaagctgatgatttgatcggg
acactggccggctgcgccgtcagggccgggaccagggtcatcatcgttaccggagatgcc
gatgccatgcagttggtcaacgatgatatcaaagtcctttatcccaaaccgggcgggaca
ttttccgacaccagattgtttgatgctgaagctgtgaacgagaaatttggcgtgccgccg
tccctggtagcggcttacaaagctctggtgggtgacacctcggataatatcaaaggggtg
ccgggcattggtcagaagacagcggttagactgctgaacgactatgacggtattgacgct
atatatgagaatattgagctgattcggccggaaaaactgagggaaacgctccggcgggag
gaatccgcagctcgtcaaagtttgacgctgtccactattgtgaccgaccttccggtggat
tttaagctggaacagtgccatgccggccgttttaaccgtgaaaaagtcgtgccgctgttg
cgggaactggagtttacctctttaatcaatcggctgccgcaaccgccttcggccagtgcc
tctgcggaggtgccgtcggtactgccgccgccggaaattgactgtcgttatcagctggtt
gatacgccggagcagctggcggccctggcggcgcggctgactgaagccgggcggtttgcc
ttggacaccgagaccacgggattagacacaatgacggccgagctggtcggtctctcagta
gcgcccgcgaccggcgaaggttattacctgccggtaggccaccttgaagctgtcggtcgg
caatggttgatttccgagctttcaaccgccctggatccggttttagccgatcccaatatc
aagaaaatcgctcacaacgccaagtacgacctgcagatactcaggcgggcgggttttact
gtagccgggctggattttgataccatgctggcggctcatttgctgggagagaagtcgtta
tcgttaaaagggctggcctttagtcgtctgggagtagagatgacgccgatcaccgcgctg
atcggcgaaggaaaaaggcagatatgtatctcacggtgtgacctcaaggaaaccgctgat
tatgcctgcgccgacgccgacatgaccttccggctgtatgagttgctggcgccggaattg
gaacgggaaaatcagtcccgcttattccacgaggtagagatgccgctggtgccggtcatc
atggatatggaaagtgccggtatcacccttgataccggcctgctgaaggggatgtccggg
cggctggcggcgcaactggagaaaattgaaaccggtatttatgaacttgccggacatccc
tttaatatcgcctcacccaaacaactgggggctgtactttttgatgaactccatctgccg
acaggccgcaaaacccacaccggttattgtaccgatgccgcagtgctggacgagcttaaa
gaccagcatgaaatcgtccgcctgattctggagtaccgcaccctggcgaaattgaaatcc
acctatgtggatactctaccggtgatggtggctgctgaagacgggcgtctgcataccagt
ttcaatcaggcgcggacggcgaccgggcggctgtcctccagcgaaccaaatttgcaaaat
atcccggtacgcggcgaactggggcgcgaaatccgccgggcttttacggcaccgccggga
cacctgttgttagccgcggattattctcagattgacctgagggcgctggcccacctgtcc
ggtgaccgcgagttgatcaatgcttttcagaatgacgatgatattcataccgccactgcc
atgcggctgtacgggctgcctcaggcagagattacaccagatatgcggcggttcgccaag
accgtcaatttcggtgtgatttacggtatgagcggctacgggctggaacaggcgactgaa
cttacccgggaggaatcaaccagattcattacgacctattttgagcgttatcccggggtt
cgggcgtatcttgatgccaccaagggacaggcgcgggcccgcggttatgtggaaaccatc
ctcggccggcgtcgctatataccggatatcaacgcggccaaccgtcaggtacgggaagcg
gcggaaagaatggccatcaatatgccggtgcagggtacgtcggcggacatcattaaggtg
gccatgctggacgtccgccgggaaatggcccggcaaaaactgcaaagccgactgctgctg
caggtccacgatgaacttatttttgaagtaccccagcaggaaatgttctttatgtcggaa
ctggccccgcgcctgatggccgaggcggttaaactggatgtaccgcttaaggttgatctg
aaatatggggccaactggggagagatggaatag

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