Candidatus Dehalogenimonas loeffleri: V8247_05085
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Entry
V8247_05085 CDS
T10610
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dlf Candidatus Dehalogenimonas loeffleri
Pathway
dlf03030
DNA replication
dlf03410
Base excision repair
dlf03420
Nucleotide excision repair
dlf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dlf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V8247_05085 (polA)
03410 Base excision repair
V8247_05085 (polA)
03420 Nucleotide excision repair
V8247_05085 (polA)
03440 Homologous recombination
V8247_05085 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlf03032
]
V8247_05085 (polA)
03400 DNA repair and recombination proteins [BR:
dlf03400
]
V8247_05085 (polA)
Enzymes [BR:
dlf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V8247_05085 (polA)
DNA replication proteins [BR:
dlf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
V8247_05085 (polA)
DNA repair and recombination proteins [BR:
dlf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
V8247_05085 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V8247_05085 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WWX24644
UniProt:
A0ABZ2J5X8
LinkDB
All DBs
Position
983279..986011
Genome browser
AA seq
910 aa
AA seq
DB search
MNTPLLVIFDASALVHRAFHAFKYSRQLTVSKTGEVTSAVFGFTNILLKVLADLKPDYYA
IAFDRKGPTFRHELSDKYKAHRPETAPELIAQLGRVRQMVEAFDIPIFEQQGYEADDLIG
TLAGCAVRAGTRVIIVTGDADAMQLVNDDIKVLYPKPGGTFSDTRLFDAEAVNEKFGVPP
SLVAAYKALVGDTSDNIKGVPGIGQKTAVRLLNDYDGIDAIYENIELIRPEKLRETLRRE
ESAARQSLTLSTIVTDLPVDFKLEQCHAGRFNREKVVPLLRELEFTSLINRLPQPPSASA
SAEVPSVLPPPEIDCRYQLVDTPEQLAALAARLTEAGRFALDTETTGLDTMTAELVGLSV
APATGEGYYLPVGHLEAVGRQWLISELSTALDPVLADPNIKKIAHNAKYDLQILRRAGFT
VAGLDFDTMLAAHLLGEKSLSLKGLAFSRLGVEMTPITALIGEGKRQICISRCDLKETAD
YACADADMTFRLYELLAPELERENQSRLFHEVEMPLVPVIMDMESAGITLDTGLLKGMSG
RLAAQLEKIETGIYELAGHPFNIASPKQLGAVLFDELHLPTGRKTHTGYCTDAAVLDELK
DQHEIVRLILEYRTLAKLKSTYVDTLPVMVAAEDGRLHTSFNQARTATGRLSSSEPNLQN
IPVRGELGREIRRAFTAPPGHLLLAADYSQIDLRALAHLSGDRELINAFQNDDDIHTATA
MRLYGLPQAEITPDMRRFAKTVNFGVIYGMSGYGLEQATELTREESTRFITTYFERYPGV
RAYLDATKGQARARGYVETILGRRRYIPDINAANRQVREAAERMAINMPVQGTSADIIKV
AMLDVRREMARQKLQSRLLLQVHDELIFEVPQQEMFFMSELAPRLMAEAVKLDVPLKVDL
KYGANWGEME
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgccgcttcttgtcatctttgatgcctctgcactggtccaccgtgcctttcat
gctttcaagtatagccggcagttaactgtcagtaaaaccggcgaggttaccagtgctgtt
tttggttttaccaatatcctgctcaaggtacttgctgacctcaagcccgattattacgct
attgcctttgaccgcaaggggccgacctttcggcatgagttatcggataaatacaaagct
caccggccggagaccgcgccggagctgatcgcgcaactgggccgggtgcggcaaatggtg
gaggcctttgatattccgatatttgaacagcagggctatgaagctgatgatttgatcggg
acactggccggctgcgccgtcagggccgggaccagggtcatcatcgttaccggagatgcc
gatgccatgcagttggtcaacgatgatatcaaagtcctttatcccaaaccgggcgggaca
ttttccgacaccagattgtttgatgctgaagctgtgaacgagaaatttggcgtgccgccg
tccctggtagcggcttacaaagctctggtgggtgacacctcggataatatcaaaggggtg
ccgggcattggtcagaagacagcggttagactgctgaacgactatgacggtattgacgct
atatatgagaatattgagctgattcggccggaaaaactgagggaaacgctccggcgggag
gaatccgcagctcgtcaaagtttgacgctgtccactattgtgaccgaccttccggtggat
tttaagctggaacagtgccatgccggccgttttaaccgtgaaaaagtcgtgccgctgttg
cgggaactggagtttacctctttaatcaatcggctgccgcaaccgccttcggccagtgcc
tctgcggaggtgccgtcggtactgccgccgccggaaattgactgtcgttatcagctggtt
gatacgccggagcagctggcggccctggcggcgcggctgactgaagccgggcggtttgcc
ttggacaccgagaccacgggattagacacaatgacggccgagctggtcggtctctcagta
gcgcccgcgaccggcgaaggttattacctgccggtaggccaccttgaagctgtcggtcgg
caatggttgatttccgagctttcaaccgccctggatccggttttagccgatcccaatatc
aagaaaatcgctcacaacgccaagtacgacctgcagatactcaggcgggcgggttttact
gtagccgggctggattttgataccatgctggcggctcatttgctgggagagaagtcgtta
tcgttaaaagggctggcctttagtcgtctgggagtagagatgacgccgatcaccgcgctg
atcggcgaaggaaaaaggcagatatgtatctcacggtgtgacctcaaggaaaccgctgat
tatgcctgcgccgacgccgacatgaccttccggctgtatgagttgctggcgccggaattg
gaacgggaaaatcagtcccgcttattccacgaggtagagatgccgctggtgccggtcatc
atggatatggaaagtgccggtatcacccttgataccggcctgctgaaggggatgtccggg
cggctggcggcgcaactggagaaaattgaaaccggtatttatgaacttgccggacatccc
tttaatatcgcctcacccaaacaactgggggctgtactttttgatgaactccatctgccg
acaggccgcaaaacccacaccggttattgtaccgatgccgcagtgctggacgagcttaaa
gaccagcatgaaatcgtccgcctgattctggagtaccgcaccctggcgaaattgaaatcc
acctatgtggatactctaccggtgatggtggctgctgaagacgggcgtctgcataccagt
ttcaatcaggcgcggacggcgaccgggcggctgtcctccagcgaaccaaatttgcaaaat
atcccggtacgcggcgaactggggcgcgaaatccgccgggcttttacggcaccgccggga
cacctgttgttagccgcggattattctcagattgacctgagggcgctggcccacctgtcc
ggtgaccgcgagttgatcaatgcttttcagaatgacgatgatattcataccgccactgcc
atgcggctgtacgggctgcctcaggcagagattacaccagatatgcggcggttcgccaag
accgtcaatttcggtgtgatttacggtatgagcggctacgggctggaacaggcgactgaa
cttacccgggaggaatcaaccagattcattacgacctattttgagcgttatcccggggtt
cgggcgtatcttgatgccaccaagggacaggcgcgggcccgcggttatgtggaaaccatc
ctcggccggcgtcgctatataccggatatcaacgcggccaaccgtcaggtacgggaagcg
gcggaaagaatggccatcaatatgccggtgcagggtacgtcggcggacatcattaaggtg
gccatgctggacgtccgccgggaaatggcccggcaaaaactgcaaagccgactgctgctg
caggtccacgatgaacttatttttgaagtaccccagcaggaaatgttctttatgtcggaa
ctggccccgcgcctgatggccgaggcggttaaactggatgtaccgcttaaggttgatctg
aaatatggggccaactggggagagatggaatag
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