Candidatus Dehalogenimonas loeffleri: V8247_05095
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Entry
V8247_05095 CDS
T10610
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dlf Candidatus Dehalogenimonas loeffleri
Pathway
dlf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dlf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V8247_05095 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlf03400
]
V8247_05095 (mutM)
Enzymes [BR:
dlf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
V8247_05095 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V8247_05095 (mutM)
DNA repair and recombination proteins [BR:
dlf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V8247_05095 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF7573
Zn_ribbon_6
Auto_anti-p27
DZR
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
WWX24646
LinkDB
All DBs
Position
986655..987467
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETVTNELRPYVTGRRIVEVKVYWPGTVKGHTPEEFIAGLEGQTVDGVYRRAKY
IVWNLSGGLRLLTHLKMTGSLIAAAPGSDAPPYNRVELTLDDGRKIYFRDPRKFGRMKLI
AGIRPLDELGPEPLEPAFTAGVFESILKKRKSPIKPTLLDQTLIAGIGNMYADESLYEAR
IHPLRAADSLTGEEYRTLHQAIQHILQAAIDSKGASISNYIRPGGELGHAHFAFKVAHKR
GEHCDRCGTLLERIVVRGRGTYLCPSCQQL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagttgagacggttaccaatgagctaaggccgtatgttaccggc
cggcgtattgttgaagttaaggtttactggccaggaacggtaaaaggtcatacaccggaa
gaatttattgccggtctggaggggcaaaccgttgacggagtttaccggcgggctaaatat
atcgtctggaatctgtccggcgggttgaggctgttgacccatctgaaaatgaccggctcc
ctgattgctgcggcgccgggaagtgacgcgccgccgtataaccgggtggaactaacgctc
gacgatggccggaaaatctatttcagggacccgcggaagttcggccgaatgaaactgatt
gcggggatccgccctctggatgaactggggccggagccgctggagccagcatttaccgcc
ggggtttttgagtctattttaaaaaaacgtaaaagccccatcaagccgacgctgctggac
cagacgctgatcgccggtatcggtaacatgtatgccgatgaatcattgtatgaggcgaga
attcacccgcttcgggcggctgacagcctgacaggcgaggagtatcgcacgctgcaccag
gctatccagcatattctccaggcggccattgacagcaagggtgccagtatctccaattac
atccgccccggcggggaactggggcacgcccactttgcctttaaggtcgcccataagcgc
ggagaacattgtgaccgctgcggcacgctgctggagcggattgtcgtaagaggccggggc
acctacctttgtccttcctgtcagcagttatga
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