Candidatus Dehalogenimonas loeffleri: V8247_06735
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Entry
V8247_06735 CDS
T10610
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dlf Candidatus Dehalogenimonas loeffleri
Brite
KEGG Orthology (KO) [BR:
dlf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
V8247_06735 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlf03019
]
V8247_06735 (rnc)
03009 Ribosome biogenesis [BR:
dlf03009
]
V8247_06735 (rnc)
03036 Chromosome and associated proteins [BR:
dlf03036
]
V8247_06735 (rnc)
Enzymes [BR:
dlf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
V8247_06735 (rnc)
Messenger RNA biogenesis [BR:
dlf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V8247_06735 (rnc)
Ribosome biogenesis [BR:
dlf03009
]
Eukaryotic type
90S particles
RNase
V8247_06735 (rnc)
Prokaryotic type
rRNA processing factors
V8247_06735 (rnc)
Chromosome and associated proteins [BR:
dlf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
V8247_06735 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
DSRM_2
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
WWX24951
UniProt:
A0ABZ2J2C7
LinkDB
All DBs
Position
complement(1294810..1295514)
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AA seq
234 aa
AA seq
DB search
MDKYAKLQDRLGVRFNDPALLELALIHSSYVNETPGNKLVPNERLEFLGDAVLGLWIAER
LYRDFPGETEGTLTRYRSLLVRRDTLAGLAGDIGLGEDLFMGRGEISSGGRRKPANLARA
LEALIAAVYLDQGHAAAGSFIDRLFAEAFKQLISLSTVDDSKSRLQELVQGEYHTTPEYR
ITRSTGAAHRRTFTAEVSMNGQVLGSGQGLSKKEAESAAAGQALKRLDNTLHSD
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgcaaaactgcaagaccgtctgggcgtccggttcaatgacccggcgctc
ctggaactggcgctgattcacagttcttatgtcaacgaaaccccgggcaataaactggtc
cccaacgaacggctggagtttctgggtgatgccgtgctgggactgtggatcgccgagagg
ctgtaccgggatttccccggggagacggagggaacgctcacccgttaccgttccctgctg
gtacgccgggatacgctggccggtttggccggggacatcggcctgggggaagatttattc
atgggccggggcgaaatcagcagcggcgggcgccggaagccggctaatctggcccgggcg
ctggaggcgctgattgccgcggtatatctggatcagggacatgccgccgccggcagtttc
attgaccgcctgtttgcggaggccttcaagcagttgatcagcctgagcacggtggacgat
tccaaaagccgcttgcaggagctggttcagggggagtatcacactacgccggaataccgg
ataacccgaagcaccggggcggcccaccgccgcacctttaccgcggaagtgagtatgaac
gggcaggtgctgggcagcggtcagggcctgagtaagaaggaggcggaatcagccgctgcc
gggcaggcgctaaagcggttggacaatactttacactccgattag
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