Candidatus Dehalogenimonas loeffleri: V8247_06965
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Entry
V8247_06965 CDS
T10610
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
dlf Candidatus Dehalogenimonas loeffleri
Pathway
dlf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dlf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V8247_06965 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlf03400
]
V8247_06965 (recO)
DNA repair and recombination proteins [BR:
dlf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
V8247_06965 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
V8247_06965 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
ArfGap
DZR
Anti-TRAP
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-ProteinID:
WWX24995
UniProt:
A0ABZ2J257
LinkDB
All DBs
Position
complement(1348694..1349542)
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AA seq
282 aa
AA seq
DB search
MSDAREIKTPAIVIKRARLKEADRVITLFTRQSGKVSALARGVRKSGSKLAGHLELLNYT
DITLTRGKGFPTIIGSQTLNPHLCLRSSLERTAYALYYAELVNHFVEEEQPSTLVFDLLV
ETLDNACTAENMELLSRFFELNLLSALGFQPQLRLCLDCGAALKAEVNYFSNSLGGLLCP
NCAAKSSVLPVSVNGQKVLRFLVDHGLAQSVRLKLDSVLNRELKQLLHNYLRYLLERDIK
SSAWLHQLEVMLPPLEPASDTRLGQSAGTGDAERLVDLQGGA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgccagggaaattaaaacaccggcgatagtcatcaagcgcgcccggctgaaa
gaggctgaccgggtgattaccttgttcacccggcaatccggcaaggtttcggcgctggcc
cggggcgtccgcaagtccggcagcaaactggccggacacctggaactgctcaattatacg
gacattactttaacgcggggcaagggcttcccgaccattatcggcagtcagacgctcaac
ccgcacctgtgcctgcgctcttcactggaaagaacggcctacgcgctgtattacgccgaa
ctggtcaaccatttcgtagaggaagagcaacccagcactctggtttttgacctgctggtt
gaaacgctggacaatgcctgcaccgccgaaaatatggagctgttgagccgcttttttgag
cttaatctgctgagcgcactgggcttccagccgcaactgcggctctgtctggactgcggc
gcggcgcttaaagccgaggtgaattacttttccaacagtctgggggggctgctgtgtccg
aactgtgcggctaaatcgtccgtgctgccggtttcggtcaacggccagaaggtgctgcgc
tttctggttgaccacgggctggctcaatcggtgcgcctgaagctggactcagtgctcaac
cgggagctgaagcaactgttgcacaactacctgcgttatctgctggaacgcgatatcaaa
agcagcgcctggctgcaccaactggaagtcatgctgccgccgttagaaccggcttcggat
acgcggttaggccaatctgcgggaactggtgatgccgagcgccttgtagatttgcagggt
ggcgcctga
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