Candidatus Dehalogenimonas loeffleri: V8247_07290
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Entry
V8247_07290 CDS
T10610
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dlf Candidatus Dehalogenimonas loeffleri
Brite
KEGG Orthology (KO) [BR:
dlf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlf03016
]
V8247_07290 (truB)
Enzymes [BR:
dlf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V8247_07290 (truB)
Transfer RNA biogenesis [BR:
dlf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V8247_07290 (truB)
Prokaryotic type
V8247_07290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DtxR
Motif
Other DBs
NCBI-ProteinID:
WWX25056
UniProt:
A0ABZ2J2N0
LinkDB
All DBs
Position
1396208..1397098
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AA seq
296 aa
AA seq
DB search
MSLNGWLNVDKPAGLTSYGVIARIKKITGRCRIGHAGTLDPLATGVLPIALGQATRTVEY
LHQLSKTYQADIELGTATDTYDAEGRITFTADASAVTLSQVAAALKGFSGSIEQIPPMYS
ALKLNGRPLYELARRGETAELKPRAVTIFRLDLLEFTSPVVRIEVECSGGTYIRSLAYDL
GQALGVGAHLKKLRRTAYGCFNIGQAVALDELTDVGGVAAALLPLDHGLDLLPRLMLDAA
MSASLSHGVVTPELRAQLAEGQAYRLYAAEGVLTAIADLTGPELRLKVFGAAQPGE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaacggctggctcaacgtagataaaccggccggcctgacctcttacggggtt
atcgcccgcatcaagaagattaccggccgttgccgtatcggccacgccggcacgctggat
ccgctggctaccggggtgctgcccatcgctctgggccaggcgacccggacggtggaatat
ctccatcagctttcaaaaacctaccaggccgatattgaactgggtacggcgaccgatacc
tacgatgccgaaggccggataacctttaccgccgatgcctccgcggtgacgctgagtcag
gtggccgccgcccttaagggtttctccggcagtattgaacagattccccccatgtacagc
gcccttaaactcaacggccgtccgttatatgagctggcgcggcggggagagacggctgag
cttaaaccgcgcgccgtcaccatcttccggttggacttgctggaatttacctccccggtg
gtgcggattgaagtggaatgcagcggtgggacctacatccgttccctggcttatgacctg
gggcaggcgctgggggtgggcgcgcatctgaaaaaattacggcggacggcttacggctgt
tttaacatcgggcaagccgtcgcgctggatgaactgactgacgtcgggggcgtcgccgcc
gctttattgccgctggaccacggactggatttactgccgcggctaatgctggacgccgct
atgtcggcgagcctcagtcacggggtggtgacgccggaactccgggcgcaactggccgaa
ggtcaggcttaccggctgtacgctgccgaaggggttctgacggccatcgccgacctgacc
gggccggagctgcggctgaaggtcttcggggccgctcagccgggggaataa
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