Candidatus Dehalogenimonas loeffleri: V8247_08270
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Entry
V8247_08270 CDS
T10610
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dlf Candidatus Dehalogenimonas loeffleri
Pathway
dlf00300
Lysine biosynthesis
dlf00470
D-Amino acid metabolism
dlf01100
Metabolic pathways
dlf01110
Biosynthesis of secondary metabolites
dlf01120
Microbial metabolism in diverse environments
dlf01230
Biosynthesis of amino acids
Module
dlf_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dlf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V8247_08270 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V8247_08270 (lysA)
Enzymes [BR:
dlf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
V8247_08270 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DUF2101
Motif
Other DBs
NCBI-ProteinID:
WWX25239
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All DBs
Position
complement(1602743..1604050)
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AA seq
435 aa
AA seq
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MKQPSKIFPISSSISDEGHLTISGYDTVTLAAEYGTPLYVFSEEDIRGRCREFATEFHRN
GHHTRIVFAGKALLNIAILKIIAEAGLGLDTVSGGELEIASAAEFPMEKVYLHGNNKSDS
ELELALEKGVGRIVIDNPGEMFRLNRLAEDRGAKPKILFRIRPGIDPHTHAKISTGNIDS
KFGFSLNEAMVSVPQAMALKNVEIVGFHYHIGSQIFEIQPFLDAMTTTLEFISEMQKVHG
FVTQELDAGGGFAVQYLSDQKPPDIGVYAEAILGHFDNECGRLKIVPPGLTIEPGRGLIA
RAAVALYTVGVIKEIPEIRNYVCVDGGMADNIRPSLYGAAYEPYLANRMNETPDKVYTVA
GRYCESGDILATDIELPAVKSGDVIVVPVCGAYCLPMASNYNGSLKPAVVMVHKGQARLI
RRREVMADLLRCDIN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaccatctaaaatatttcctatcagctcatctatttctgatgaaggtcatttg
accataagcggatacgataccgttaccctggccgcagagtacggcactccattatatgta
ttctcggaagaagacatcaggggacgttgccgagagtttgctaccgaattccaccgaaat
ggtcatcatacaagaattgtgtttgccggcaaggcgttgctgaatattgctattctcaaa
atcatcgctgaagcagggttgggcttggataccgtgtctggtggtgagcttgagattgca
tctgccgccgagtttcctatggaaaaagtatacctgcatgggaacaataaatctgacagc
gagcttgaattagctcttgaaaaaggggtcgggcggattgtcattgataatcctggggaa
atgttccgcttgaatcgccttgctgaagaccggggggccaaaccgaaaattttatttcgg
ataaggccaggcatcgaccctcatacccatgctaagatttctactggaaatattgattct
aaattcggttttagccttaatgaagcgatggtctcagtcccccaggcgatggctttgaaa
aatgttgagatagtgggatttcactatcatattggatcacagatatttgagatccagcca
ttccttgatgccatgacgacaaccttagagttcatttcagaaatgcaaaaggtgcatggc
ttcgtaacacaagaacttgatgccggcggaggtttcgcagttcaatacctgtcagaccag
aaaccgccggatatcggcgtttatgccgaagctattttaggccactttgacaatgagtgc
ggtcgattgaaaattgtacccccaggtttaaccattgagccgggcaggggattgatcgcc
cgggctgcggtcgctttatatacagttggcgttatcaaggaaatacccgagataagaaat
tatgtttgcgttgacggcgggatggctgataatatccgaccttctttgtatggtgccgca
tatgagccttacctggccaatcggatgaatgaaaccccggataaggtttatacggttgcg
ggacgttattgcgaatccggagacatcctagcaactgacattgaattgcccgcggtcaaa
tccggggacgtcatcgttgtgcccgtttgcggggcttattgcctccctatggcatcaaac
tacaacggttcgctcaaacctgcggtagtgatggtccataaaggccaggcgagattgatc
cgacgccgggaagtaatggctgacttattacgatgtgatatcaattga
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