Desulfovibrio legallii: GTC18478_22520
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Entry
GTC18478_22520 CDS
T11922
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dlg Desulfovibrio legallii
Pathway
dlg03030
DNA replication
dlg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GTC18478_22520 (dnaE)
03430 Mismatch repair
GTC18478_22520 (dnaE)
03440 Homologous recombination
GTC18478_22520 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlg03032
]
GTC18478_22520 (dnaE)
03400 DNA repair and recombination proteins [BR:
dlg03400
]
GTC18478_22520 (dnaE)
Enzymes [BR:
dlg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GTC18478_22520 (dnaE)
DNA replication proteins [BR:
dlg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GTC18478_22520 (dnaE)
DNA repair and recombination proteins [BR:
dlg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GTC18478_22520 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
BGH00291
LinkDB
All DBs
Position
2675098..2678589
Genome browser
AA seq
1163 aa
AA seq
DB search
MADFVHLHCHTEYSLLDGAIRIKDLCARAKDYGMPACAVTDHGNLFAAAYFYRTCKDFGI
KPIVGCEVYVCHDHKDKSPDSPLARTRHHLILLAQNTVGYHNLVKLVSQGYLEGFYYKPR
VDKAQLRKYSEGLICLSACIAGEIPRAVIKDNDMDKALRLTREYADIYPGRFYLELQSNG
LKEQEVANTALMELAETTGLPLVATNDCHYLNADDAEAHEVLLCIQTQTTMDDPNRMRFG
THELYYKSVEEMEKPFAHVPEALANTLRIAEQCQVEMDFGHHYFPVYALPQGASLESEFR
RLAEEGLERRLEKHPDREHIDPQAYRDRLQYELKVIIEMGFPGYFLIVQEFINWAKNHHV
PVGPGRGSAAGSLVAWALRITNLDPLPYNLLFERFLNNERVSLPDIDVDFCERRRGDVIR
HMVDTYGEGSVAQITTFGTMKAKGVVRDVGRALGMSFAETDRIAKLVPADLKMTIQKALE
MEPDLEKIYREDPKVTHLLDTARRLEGLARHASTHAAGLVVSDKPMVEYLPLYQGKRGEL
VTQFDGPMTEKVGLVKFDFLGLKTMTLIQDTLDNISLQGQTPPDLDNLPLTDAATYDLYA
RGDTDGVFQVESSGMRQYLRMLKPTCFEDVIAMLALYRPGPLGSGMVDEFIKRKHGQVPV
VYPHDSLQECLRDTYGVIVYQEQVMQIAQIIASYTLGGADLLRRAMGKKKAEAMAKERVT
FVAGAEKNGIGKDKANEIFDLMEKFAEYGFNKSHSAAYALISYYTAYLKVHYKVEFMAAL
LTSEMGNQDKLLKYVSCCKDMGIDVVQPSVNQSQREFTAHNGQVVFGLGGIKNVGDEAIR
ELVEARKTEGGYTSLLDLCCRVNLRKVTKRVLESLVKGGACDCFNVPRAAMLAALDLVVS
RAQKKAKEKSSNQVSLLAMAPALEAKPLPGIGLDCPEAQAPEMSDDDKLKGEKEALGFFL
TSHPLLPFIREMRRLNLTTLEDARELFPGAELRCAALVVSLKEVITKSRGERMAFVGIED
LTGHAEVTFFPRSYAECRSLLQSEQPLCLTARLDSQNDAADNRDMGDEEEDAPRELKLLG
QSVRPLAEACGDSDTPVCVQIPPHRLGREDMLTLRSILESHPGPVEAQAQICLDGHVCLL
LLDSALKVRPGPELDKALSAWAS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggccgattttgtccacctgcactgccatacggaatacagcctgctggacggcgccatc
cgcatcaaggatctttgcgcccgcgccaaggattacggcatgcccgcctgcgctgttacc
gaccacggcaatctttttgccgcagcctacttctatcgcacctgcaaagacttcggcatc
aagcccattgtgggctgcgaggtctacgtttgccacgaccacaaggacaaaagcccggat
tcgcccctggcccgcacccgccaccacctcatcctgctggcccagaacaccgttggctac
cacaatctggtcaagctggtcagccagggctacctggaaggtttctactacaaaccgcgc
gtggacaaggcccagctgcgcaagtattccgaagggctgatctgcctttcggcctgcatt
gccggtgaaatcccacgcgccgtgatcaaagacaacgacatggacaaggccctgcgcctg
acccgtgaatacgccgacatctatcccggccggttctatcttgagctgcagtccaacggc
ctcaaggaacaggaagtagccaacacggccctgatggaactggccgaaaccacgggcctg
cccctggtcgccaccaacgactgccactacctcaatgccgacgacgccgaagcccacgag
gtgctgctctgcatccagacgcagaccactatggacgaccccaaccgcatgcgcttcggc
acccacgagctgtactacaagtccgtggaggagatggaaaaaccctttgcccatgtgccc
gaagccctggccaacaccctgcgcatagcggaacagtgccaggtggaaatggacttcggc
caccactactttcccgtctacgctctgccccagggggccagcctggaatccgaattccgc
cgcctggccgaagaaggcctggaacgccgcctggaaaagcaccccgaccgcgagcacatc
gacccgcaggcctaccgcgaccgtctgcagtacgaacttaaggtcatcatagaaatgggc
tttcccggctattttcttattgtgcaggagttcatcaactgggccaagaaccaccatgtc
ccggtggggccgggacgcggttccgccgctggctctctggtggcctgggccttgcgcatc
accaacctggaccccctgccctacaatctgctgtttgaacgctttctgaacaacgaacgt
gtctccctgcccgatatcgacgtggacttctgcgagcgccgccggggcgacgtcatccgc
catatggtggacacctacggcgaaggctcggtggcgcagatcaccacctttggcaccatg
aaggccaagggcgtggtgcgcgacgtgggccgcgccctgggcatgagttttgcggaaacg
gaccgcatcgccaagctggtgcccgccgatctcaaaatgactatccagaaggccctggaa
atggagccggacctggaaaaaatctatagggaagaccccaaggtcacccacctgctggat
acggcccgccgcctggagggcctggcccgccacgcctccacccacgccgccgggctggtg
gtttcggacaagcccatggtggagtacctgcccctctaccagggcaaacgcggcgaactg
gtgacccagttcgacggccccatgaccgaaaaagtcggcctggtcaaattcgactttctg
ggccttaagaccatgacccttatccaggataccctggacaacatcagcctgcaggggcaa
accccgccagatctggacaacctgcccctcaccgacgccgctacctacgacctctacgcc
cgcggcgacacggacggcgtgtttcaggtggaaagctccggcatgcgccagtacctgcgc
atgctcaaacccacctgctttgaagacgtcatcgccatgctggccttgtaccggcccggc
cccctgggttcgggcatggtggacgagttcatcaagcgcaaacacggccaggtgcccgtg
gtctatccgcacgactccctgcaggaatgcctgcgcgacacctacggcgtcatcgtttat
caggaacaagtcatgcagatcgcccagatcatcgccagctacacgttgggcggggccgac
ctgctgcgccgggccatgggcaagaaaaaagccgaagccatggccaaggaacgcgtgacc
tttgtggccggggcggaaaaaaacggcatcggtaaagacaaggccaatgaaatttttgac
ttgatggaaaaatttgcggaatacggcttcaacaagtcccactccgccgcctatgccctt
atttcctactacacggcctacctcaaggtgcactacaaggtggagttcatggccgccctg
ctcacctctgaaatgggtaaccaggacaagctgctcaaatacgtttcctgctgcaaagat
atgggcatagacgtggtgcagccctcagtaaaccagagccaacgcgaattcacggcccac
aacggccaagtggtcttcggcctgggcggcatcaaaaacgtgggcgacgaagccatccgc
gaactggtggaagcccgcaaaaccgaaggcggctacacctccctgctggacctctgctgc
cgggtcaacctgcgcaaggtcaccaaaagagtgctggaatcgttggtcaaaggcggggcc
tgcgattgcttcaacgtgccccgcgcggccatgctggcggccctggacctggtagtgagc
cgcgcccagaaaaaggccaaggaaaaaagctccaaccaggtttccctgctggccatggcc
ccggccctggaggccaaacctctgcccggcatcggcctggactgccccgaagcccaggcg
ccggaaatgagcgacgacgacaagctcaaaggcgaaaaagaggctctgggcttcttcctg
accagccaccccctgctgccctttatccgcgaaatgcgccgactgaacctcaccacactg
gaagacgcgcgtgaactcttccccggtgcggaactgcgctgcgccgccctggtggtcagc
ctcaaggaggtcatcaccaaatcccgcggcgaacgcatggcctttgtgggcattgaagac
cttacaggccacgcggaggtgaccttctttccccgttcctacgccgaatgccgcagtttg
ctgcagtccgagcaacccctctgcctcacggcccggctggacagccagaacgacgcggcc
gacaaccgcgacatgggggatgaggaagaggatgccccccgcgaactgaaattgctgggg
cagagcgtccgccccctggccgaggcctgcggcgacagcgatacgcccgtgtgcgtgcag
ataccgccgcaccgcctgggtcgggaagatatgctgaccctgcgctccattctggaaagc
caccccggccccgtggaggcccaggcccagatctgcctggacgggcacgtctgcctgctg
ctgctggacagcgccctcaaggtgcggcccggcccggaactggataaggcgctttccgcc
tgggcgtcgtag
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