Desulfonema limicola: dnl_05500
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Entry
dnl_05500 CDS
T07101
Name
(GenBank) Periplasmic [NiFe] hydrogenase, large subunit
KO
K23549
uptake hydrogenase large subunit [EC:
1.12.99.6
]
Organism
dli
Desulfonema limicola
Pathway
dli00633
Nitrotoluene degradation
dli01120
Microbial metabolism in diverse environments
dli02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
dnl_05500
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
dnl_05500
Enzymes [BR:
dli01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
dnl_05500
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GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
QTA78329
UniProt:
A0A975GEP3
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All DBs
Position
complement(601797..603293)
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AA seq
498 aa
AA seq
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MSRKYIFPINRVEGDLEIQVELKDGIITEAWSAGTMYRGFENIMKGRSPMDGLVITPRVC
GICSTAHLKAAAKALDMAYNIVIPDTAKMIRNITMGVEMLQNDVRQAVLLFMCDFANPYY
KDFPLFKEAVSRYEPLKGSSALQTLVESAAIIEITAVIGGQWPHSSFMVPGGVVSSPSIN
DINQCTYLLNRYRKWYEKQILGCRLERWAEVKNNLDLDKWLEESHLHADSDLGFFIRFSK
KAGLDKIGKGHGNFICFGSFDMPENTDIKSLNKGPKYLPAGFSQHTRIQALQEESIFEDS
TCSWFKTDDRPLHPFEGLTIPYATGGEGKKYSWAKAPRYQGLPAETGPLAQMIIAENPLF
TNLVSSKGPDVFSRELARIVRPAIIIPVLDKWIKEIARNMENFCRTYQEKESGKGFGLIE
APRGALGHWIHFKNEKIENYQIITPSAWNGSPRDLNGVRGPWEQALVGTSIQDTDNPVEA
GHIIRSFDPCLVCTVHAI
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaaatatatattcccgataaaccgggttgaaggtgatctggagatccaggta
gaattaaaagatggaataataacagaggcatggagtgccggaaccatgtaccggggtttt
gaaaatataatgaaaggccgaagccccatggacgggcttgtaataactcccagggtttgc
ggtatttgcagcactgctcatcttaaagcagcagcaaaagccctggacatggcttataat
attgttatccctgatactgcaaaaatgatccgcaatattactatgggagtggaaatgctc
caaaatgatgtgcgccaggcagttctgctttttatgtgtgattttgcaaatccttattat
aaagatttccctttgtttaaagaagctgtaagcagatatgaacccttaaaaggcagttca
gcattacagacacttgtggaaagtgcagccattattgaaatcactgctgttataggaggc
cagtggccccattcctcgttcatggttccaggaggtgttgtatcatctccctccataaac
gatataaaccagtgtacatacctcttaaaccgataccgcaaatggtatgaaaaacagata
ctgggatgcaggcttgaaagatgggcagaagtaaaaaacaaccttgatcttgataaatgg
cttgaagaatctcatttacatgcagacagcgaccttggcttttttatcaggttttcaaaa
aaagcaggtcttgacaagattggtaaaggacatggaaacttcatttgtttcggctctttt
gacatgcctgaaaatacagatataaaatccttgaacaagggacccaaatatttacctgcc
ggattttcacagcacacccgtatccaggcactgcaggaagaaagtatatttgaagattca
acatgttcatggttcaaaacagatgacaggcccctgcacccttttgaaggacttacaata
ccttatgccacaggcggggaagggaaaaaatactcatgggccaaagctccccgttatcaa
gggttacctgctgaaacaggccccctggctcaaatgataattgctgaaaatcctcttttt
acaaacctggtcagctcaaagggaccagatgttttttccagggaactggcacgtattgta
agacctgccataataatacctgtactggataaatggattaaagaaattgcccgcaacatg
gaaaatttttgcaggacttatcaggaaaaggaatcaggaaaaggttttgggcttattgaa
gctcctcgcggggcattggggcactggattcattttaaaaatgaaaagattgaaaactac
cagataataaccccttctgcatggaacggatctccacgggatttaaacggtgtaagaggt
ccctgggaacaggcccttgtaggaacttcaatacaggatactgacaacccggttgaagct
ggtcacattatcaggtcatttgacccgtgtcttgtctgtactgttcatgcaatttaa
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