Desulfonema limicola: dnl_05890
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Entry
dnl_05890 CDS
T07101
Name
(GenBank) Cyclic nucleotide-binding domain-containing protein, DUF4388
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
dli
Desulfonema limicola
Pathway
dli02020
Two-component system
dli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
dnl_05890
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
dnl_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dli03000
]
dnl_05890
Transcription factors [BR:
dli03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
dnl_05890
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF4388
Motif
Other DBs
NCBI-ProteinID:
QTA78367
UniProt:
A0A975B3Y9
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Position
complement(641590..642657)
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AA seq
355 aa
AA seq
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MNIPDTIYKIIEDHQCPLYKQGDVFTLSGRSLNTPPGKPVCMVLMTDFSVAIAKYQKLDT
EHKGKSSRYRFICSGPETSCTGAMRMEGRVKIDDIETKETLEKYEKIRSIINVLSQFPIF
RGLNESQLQELGTFLKLVNYKKGDLVIEKGTPGLNLYIIAAGRVEVIGEDDIPITLLEQG
EIFGEMSLISGQPVGATIKAVETLKLLYIKGKDFGKILENYPSVQIYFARLLATRLTKTN
IARTEDFKSGMTGNLCEIPPAELFQSLNINQKSGTVELSVLNKTAIIGFRDGELVRAEYD
NKTGTEAFFEIIKQTSGRFKFSSELSETDRKAPAMGEFMWMLMEGVRKIDEENVC
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcctgacactatctataagattattgaggaccaccagtgccccctttataaa
cagggagatgtgtttactctttcaggcagatcccttaacactcctcctggaaaaccggtg
tgcatggttcttatgacagatttcagtgttgcaatcgcaaagtaccagaaacttgatact
gaacataaaggtaaaagcagcagataccgctttatatgcagcggccctgaaacatcctgc
acaggtgccatgcgcatggaaggccgtgtaaaaatagatgatattgaaacaaaagaaacc
ttggaaaaatatgaaaaaataagatcaattataaatgtcttatcccagtttcccattttc
aggggacttaatgaaagccagttacaggaactggggacttttttaaaactggtcaattat
aaaaaaggagaccttgtaattgaaaaaggaactccaggcttaaacctttatattattgca
gcaggcagggttgaagttattggagaagatgatatacctattacacttctggaacaaggt
gaaatattcggtgaaatgagcctcataagcggccagcccgtgggagcaacaataaaagct
gtggaaactttgaagctgttatatattaaaggtaaagattttggaaaaattttggaaaac
tacccttcagtacagatttattttgccaggcttcttgcaacaagacttacaaaaaccaat
attgcaagaaccgaagattttaaatcaggcatgacaggaaatctttgtgaaataccgcct
gctgaactttttcaaagccttaatattaaccagaaatccggcactgttgaactatctgtt
ttaaataaaacagcaataataggatttagggatggagagcttgtcagggctgaatatgac
aataaaacgggaactgaagctttttttgagattataaaacaaacaagcggaagatttaaa
ttcagttcggaattatctgaaacagacagaaaagcccctgctatgggggaatttatgtgg
atgctcatggaaggggttcggaagattgacgaggagaatgtatgttaa
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