Desulfonema limicola: dnl_08370
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Entry
dnl_08370 CDS
T07101
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dli03032
]
dnl_08370 (topB)
Enzymes [BR:
dli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
dnl_08370 (topB)
DNA replication proteins [BR:
dli03032
]
Prokaryotic type
DNA Topoisomerases
dnl_08370 (topB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
DUF5679
Zn_ribbon_Top1
Zn_ribbon_PADR1
GYF_2
Motif
Other DBs
NCBI-ProteinID:
QTA78613
UniProt:
A0A975GEW4
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All DBs
Position
904160..906619
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AA seq
819 aa
AA seq
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MKTLILTEKPSVAMDFAKALGVKGAKQDGFIENESYIITWAVGHLVELLNPDEYDPKWKA
WRLETLPIIPERFYYKPIPNTEKQLRVISGLLKRPIDKLIIATDAGREGEVIARTILLFS
GFNDFDKLKRFWTSQALTPQVVKQGMQSFLPASQYDRLWRAGQARQIADWLVGMSCTRAA
TIAARQSVNTENTGKNDLFSVGRVQTAVLSLLVDRRRERENFKPEPYWLLRAYFINEKGQ
WQGSWFKKEQTRFDREEEAKQVLDKIKAQTGIVTSVKKQKKNQAPPFLYSLTELQQEANR
KFSFSAKDTLGIAQDLYEQKKCLSYPRTDSVVLGSQNVGMAGDIVNKLSDIYPGIFAGIR
HELIDIKNKRVFNDARLTDHHALIPLAPVPQSAGGDEKKIYGLVLKRFAAAFYPDFEFEQ
TDIITEVEKEEFQTRGKRILNLGWKAVYQDEASKKDEEKKDDDEPENLPPLINGDPAIVK
DAGLEKKMTQPPPEYTEALLLKDMTNPGRYVSEDELKKVYRGDTGLGTQATRAQIIETLL
TREYLIRIKKQLKATDKGCRLIESLRRFNFAKILTSPEETARWEMQLEQIAQGNGSDTEF
LNGIKNLVQNIIQEFKTRTKGGPKVLGKCPDCGGDIIEGKKGYGCSNWREEDGSCRFVVW
KNTAQKNINIQMLKQLLEKGSIGPFDDFISKKGSPFSAELKLVVQDGKWEVKFDFDNGQD
EGNKEPVGKCPVCGGNVIETQKAYGCSNWKEEDGACKFVIWKTMAQKEISRKAAAALLEN
GITDQLFGFISRKGKAFSARLKLEGEKPDLPKVVFVFPD
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacttattttgactgaaaagccttctgttgcaatggattttgcaaaggctctg
ggtgttaaaggagcaaagcaggacggttttattgaaaatgaatcctatattataacctgg
gctgtcggacaccttgtggaacttcttaaccctgatgaatatgatccaaagtggaaagca
tggcggcttgaaaccctgcctattattcctgaaagattttattacaaacctattccaaat
acggaaaaacagctcagggtaatatcaggacttcttaaacggcccatagacaagctgatt
atagccactgatgcaggccgtgaaggagaggttattgccaggacaatcctgcttttttca
gggtttaatgattttgataaactcaagcgcttctggacaagtcaggcattgactccccag
gttgtaaaacaggggatgcagtcatttttacctgcatcccagtatgaccggctgtggaga
gcaggtcaggccaggcagattgctgactggcttgtgggcatgagctgcacccgtgctgcc
actattgctgcacggcagtctgttaatacagaaaatacaggaaaaaacgacctgttcagt
gtcggcagggttcaaactgctgtgctttcacttcttgttgaccggcgcagggaaagggaa
aatttcaaacctgagccttactggctacttcgtgcttattttattaatgaaaaaggccaa
tggcagggtagctggtttaaaaaagaacagaccaggtttgacagggaagaggaagcaaaa
caggttctggataaaatcaaggcacagaccggaattgtaacctctgttaaaaaacagaaa
aaaaatcaggctcctccttttctttattcccttacagagcttcagcaggaagcaaacagg
aaattttctttttcagcaaaagatactcttggaattgcccaggatttgtatgagcagaaa
aaatgtctttcttatccaagaaccgattctgttgtactcggctcccaaaatgtcggcatg
gcaggagatattgtaaacaaattgtcagacatttatcctggaatctttgcaggaatcagg
catgagcttatagatataaaaaacaaacgtgtatttaatgatgccaggcttacagatcat
catgccctgattccccttgctcctgttcctcaaagtgcaggtggtgatgagaaaaagata
tacggccttgttttaaagcgttttgctgctgcgttttaccctgattttgaatttgagcag
acagatattataacagaggttgaaaaagaagaatttcagaccaggggcaaaaggattctc
aatttaggatggaaagcagtttaccaggatgaagcctcaaaaaaggatgaagaaaaaaaa
gatgatgatgagcctgaaaatcttccccctttgattaacggagaccctgccattgtaaag
gatgcagggcttgaaaaaaagatgacccagcccccgcctgaatataccgaagccctgctg
ctgaaagatatgacaaatccagggcgttatgtttctgaagacgagcttaaaaaagtatat
cggggtgatacaggtctgggaacccaggcaacaagggcccagattatagaaaccctttta
acacgggaatatttgataagaataaaaaagcagcttaaagcaacagataagggatgcagg
cttattgaatccctgcgccggtttaattttgcaaaaatacttacatctcctgaagaaact
gcccgctgggaaatgcagcttgagcagattgcccagggcaacggctcagataccgagttt
ttaaacggaataaagaacctggttcaaaatataatccaggaattcaaaaccaggacaaaa
ggaggccctaaggttcttggaaaatgccctgactgcggcggagatattattgaagggaaa
aaaggatacgggtgttctaactggcgtgaggaagacggatcatgcaggtttgttgtatgg
aaaaatactgcacagaaaaacattaatattcagatgcttaaacagcttcttgaaaaaggc
agcataggcccgtttgatgattttatttcaaaaaaaggcagtcctttttcagcagaatta
aaactggttgtccaggatggaaaatgggaagttaaatttgattttgataatggacaggat
gagggaaacaaggagcctgtcggcaaatgccctgtatgcggcggtaatgtaatagaaact
caaaaggcttacggctgttcaaactggaaggaagaagacggggcatgtaaatttgtgata
tggaaaacaatggctcagaaagaaatatccaggaaagctgctgctgcactgcttgaaaat
ggcataacagatcagcttttcgggtttatatccagaaaaggcaaagctttttctgccaga
ctcaagcttgaaggggaaaaacctgatctgccaaaagtagtttttgtttttcctgattaa
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