Desulfonema limicola: dnl_08400
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Entry
dnl_08400 CDS
T07101
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
dli
Desulfonema limicola
Pathway
dli00541
Biosynthesis of various nucleotide sugars
dli01100
Metabolic pathways
dli01250
Biosynthesis of nucleotide sugars
Module
dli_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
dnl_08400 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dli01005
]
dnl_08400 (kdsA)
Enzymes [BR:
dli01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
dnl_08400 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
dli01005
]
Lipid A
dnl_08400 (kdsA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
QTA78616
UniProt:
A0A975B4H1
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Position
910600..911418
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AA seq
272 aa
AA seq
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MTKMVKIENISVGGASPLVLISGPCVIEDYKTTYDIALYLKTLTQDLDMPFIFKASYDKA
NRTSVNAFRGPGVKQGLEILDAVKKELKIMILSDVHQLSEVEQASQVLDIIQVPAFLCRQ
TDLIFEVAKTGKTVNIKKGQFLAPWDTANIIEKVLSVGNERVLITERGTMFGYNNLVVDF
RGIKIMQDTTGCPVIFDATHSVQLPGGSGKSSGGQREFAPILARASVAAGADGVFLEVHK
DPDAALCDGPNSLRLDDLGPLLSQLKELKSII
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaatggttaaaatagaaaatatatctgttggaggggcatctccactggtttta
atctctggtccttgtgtgattgaagattataaaacaacatatgacattgctttatatctc
aaaacccttactcaggatctggatatgccttttatatttaaggcttcttatgacaaagcc
aacagaacatcagtaaatgcattcagggggcctggagtcaaacaggggcttgaaatcctg
gatgctgttaaaaaagaacttaaaatcatgatattgtcagatgttcatcaattgtctgaa
gtagagcaggcatcccaggttcttgacataatccaggttccggcttttttatgcaggcag
acagatttgatttttgaggttgccaaaacaggaaagactgttaatattaagaaaggacag
tttcttgctccctgggacacggcaaatattattgaaaaggttttatctgtgggaaatgaa
cgggttcttattacagaaaggggtaccatgtttggttataataacctggtggttgatttc
aggggtataaagattatgcaggatacaacaggatgtcctgtaatatttgacgcaacccac
agtgttcagcttcctggaggttctggaaaatcatcagggggccagagggaatttgcaccc
atacttgcaagagcttctgttgcagcaggtgcagatggtgtatttctggaggtacataaa
gaccctgatgctgcattatgcgacggccccaattcattaagacttgatgatctaggcccc
ttgctttcccagcttaaagagcttaaaagtattatatga
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