Desulfonema limicola: dnl_08690
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Entry
dnl_08690 CDS
T07101
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dli03016
]
dnl_08690 (truB)
Enzymes [BR:
dli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
dnl_08690 (truB)
Transfer RNA biogenesis [BR:
dli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
dnl_08690 (truB)
Prokaryotic type
dnl_08690 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
UPF0113
Motif
Other DBs
NCBI-ProteinID:
QTA78645
UniProt:
A0A975GEZ6
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All DBs
Position
complement(941974..942900)
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AA seq
308 aa
AA seq
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MLNGILLVDKPENMSSAKLVSKIKHLARVKKAGHAGTLDPFATGLMICCLNKATKLSGFF
LNSSKTYEGTLCLGIETDTQDSTGTIISRYDKTEFDLEAIKKVFAEFTGSIKQMPPVYSA
LKHQGIPLYKLARKGKPVQKPEREIFISNLDITAVNLPEIKFCVSCSSGTYIRTLAADIG
KKLGSGAHLKQLRRTGSGRFIVKNAVSLEKIAEMADSGNIKNHIVSMSDALSYLPYFQAD
KFLTEKIMYGRTIFHKDIKPCVEDLSDNHLRVVDKNNRLLAVLSHKKNSDSYNYCCVFIN
NMDNIQNN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacggaatccttcttgtagataagcctgagaacatgagttcagcaaaactggtt
tcaaaaataaaacatcttgccagggtaaaaaaagcaggtcatgcaggcacccttgaccct
tttgcaacaggcttgatgatttgctgcttaaataaagccacaaagctttctggttttttt
ctaaacagcagtaaaacctatgaaggaaccttgtgcctgggaatagaaacagatacacaa
gacagtaccggcactattatatcaagatatgataaaacagaatttgacttagaagccatt
aaaaaagtatttgcagaatttacaggatcaataaagcagatgccccctgtatattcagca
ttaaaacatcagggaatccctctttacaaacttgccagaaagggaaaacctgttcaaaaa
ccggagcgtgagatttttatttcaaaccttgatattacagcagttaatctgcctgaaatt
aaattctgtgtttcatgctcatcaggcacctatataagaacgcttgcagcagatatagga
aaaaaactgggatccggggcacatctaaaacaattacgcagaacaggttctggcagattt
attgttaaaaatgctgtttccctggaaaaaattgctgaaatggcagattcaggaaatata
aaaaatcacatagtttcaatgtctgatgctttatcatatctgccttattttcaagcagat
aaatttttgactgaaaaaataatgtatggcagaacaatttttcacaaagatataaaaccc
tgtgttgaagatttatctgataatcatcttcgggttgtggataaaaataaccgtctgctt
gcagtactcagtcataaaaaaaacagtgattcatataattattgttgtgttttcatcaat
aacatggataatatacaaaataattaa
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