Desulfonema limicola: dnl_10130
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Entry
dnl_10130 CDS
T07101
Name
(GenBank) Cell adhesion related domain (CARDB)-containing protein, immunoglobulin-like fold-containing
Organism
dli
Desulfonema limicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RLD
RCC1
RCC1_2
Big_9
Cadherin_5
Cadherin_4
CARDB
Kre9_KNH
Alsin_RLD
SBBP
Big_5
DUF4832
DUF4625
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
QTA78778
UniProt:
A0A975GF19
LinkDB
All DBs
Position
complement(1116393..1121777)
Genome browser
AA seq
1794 aa
AA seq
DB search
MKKNIKVFKLISIIAIFSIIISFFTIDSFAARIGNNYEQQMPVPGVKAPSVRIKTLSSIN
PGESVDLTANETVDEKNGASSFFYWYADRGSFEVNPAYPDYSTVTYTAPAASDTVNISVR
VGDTLGYVAKDTVSITVGDGATVDPGDLTPVNEDCTYTVTPSDWQQVYHTEYLLTAERTA
TNKSIGHFRIQPEFDNQLWDYSGHVQVIINGSPVTLYEDSELQIVHGPSYGYHPGGQGFE
IWFDADFSSHKSITLHQSEDSAFGGWDTVWMMKAKCPVSVKNGTPDLTVKNAEAEPLRMA
PGEVVNTRVRISNIGDASANASTLGCYLSVNGSTWDSSDILMYQEKVKTIIDGRNAYVET
DVTIPENFDSGDYYLIFRADDEGIINEENTDNNEANVRIEVRDGADLTVSHTDIVKANVT
PGKSVTLSARVTNSGGTGTLAASRLGYYLSLDEEWDSSDTLLGTNYFGSLLPAQSESFTR
TFTIPASLPFGHHYIIFYADYDKNVSETNTDNNRVPVSIQVNYSKEMTVFIPNAQTSWSA
GRDQTIEWTSNLGGTVKIELYKSLTRKIVISNSAPNNGSFIWKIAADLTPDTNYWIKIIS
NADTSISDDSERFAITYPQTLTLMTPGNNDIWGYGTTRNITWSSSFKGIVDIDLYKAGSF
YRTVDRAVETTSVSDNTYAWIIPSDIPEGADYQISVTHSSDRSTFDMNDGYFSIADPNAN
NDPVAIDDSATTEQETAVIISVLANDNPIDGETLKISAITQGENGTVVINGDNTITYTPA
SGFAGSDYFTYTVISTGNGVKTATVYITVSEGIVICDTWELPPGAGTLAKDEAGNVYAVG
GFRDSITLGNDSPVTLTADGLSAIYIAKYSPSGSLIWAQKATAEYGEIAPNIAVDKTGNL
YISGYYQYTMNIYNGDAVFKTLSEEGIGGYEVFIAKYNPLGQPVWAEMAGGQWDDFGESL
MVDSASGYLYIGGSFDGILNLGSGASATTLNSADDNVDMFLAKYTLNGTLVWAKNVAGGT
ASIFSIASDGADGVLATGYYEENVTFSGASPVTLTGTRSRQFFIAEFSADNGQAKWAQKA
NGYNSIGRDVAVDDTGNIYVTGTFNQTCDFYNGNTVFKTLNNYQDRDEMFMIKYNANGTP
EWIRQAGGSSYDSGEAITFDGNKNPVFIGSFYQYPAEFTKDASGQTIVSNTSGIATYDAN
GNFQGFMEPGTGMLIAETSGNPAIIGKDGVVSPCGTISVNNPPVVVDDTANTIEEQPVTI
NVLDNDSDPDGDTLSVTNVTQGANGGVMIDTGGLTVTYTPNAGFMGTDTFEYTVSDGNGG
VSTASVSILVESGASALSVTDIQPSDTGAVTVNQVFTFTLNEPVTAGTCYSSISLEDSNG
TSVSINTVINGNGLTIEPATTLASGMDYILTIPVCALEGATGGNALSEDILHAFTTESGS
TSVIFTDITAGNDHTVALDSDGNVWAWGGNNYGQVGDGSVEDRLTPVQVQGVSNITEIAA
GAWHTLALDIYGSVWAWGYNPDGQLGNGTQINSSVPVNVSGLTDIIAIATGNSHSIALKG
DGTVWTWGKNSSYQLGHGLGDTTDELIPGQVPNLFNVIDIAGGYNFTTVLKQDRTVWSWG
RNDRGQLGTGDIIDRKVPAQALLAANADSIYGTLGTRAFAIMTDGTVWGWGYNGMNGAVG
NGSGWDQPFPVKVLDNATDLSGGEWHTIALTSDGTIKAWGRNDEGEYGNGTTNYSSTPVP
GADISNVINIEAGRVFTVALKENGTIWCWGYNGKGQLGNNTTENALIPVQVIIK
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatataaaagttttcaaattgataagcataattgccatattttcaattatc
ataagcttttttaccatagactcttttgcagccagaatcggcaataactatgaacagcaa
atgcctgttcccggcgtaaaagcaccttcggtaagaataaaaactctttccagtattaat
cccggtgaaagcgttgatcttactgcaaatgaaacagttgatgaaaaaaatggagcaagc
tcttttttctactggtatgcagacagaggaagctttgaagtcaatcctgcatatcctgat
tacagcacggttacatacactgcaccggctgcatccgatactgttaatatttctgtaagg
gtcggcgatacgttaggatatgttgcaaaagatacagtttcaattacagtcggcgacggc
gctactgttgaccctggcgatctcacgcctgtgaacgaagactgcacctacacagtcaca
ccttcggactggcagcaggtttatcatacagaatatcttctcacggctgaaagaactgca
actaacaaatccatcggccatttccgtattcagccggaatttgacaatcagctttgggat
tacagcgggcatgttcaggttattattaacggttccccggtaacattgtatgaagactcg
gaactgcaaattgttcacggaccaagttacggataccatcccggaggacaaggttttgaa
atctggtttgatgcggatttttccagccataaaagcattacccttcatcagagtgaagat
tcggcattcggcggatgggatacggtctggatgatgaaagccaaatgtccggtatctgtg
aaaaacggcacacctgatttgactgtaaaaaacgctgaagccgaacctctgcgtatggct
ccgggtgaagttgtcaatacacgggtgagaatatccaatatcggagatgcctctgcaaat
gcatccacacttggctgttatctatctgtcaatggcagcacatgggattcatctgatatt
ctcatgtatcaggagaaagtcaaaacaattattgacggaagaaatgcctatgtggaaaca
gatgtcaccattcctgaaaattttgattccggcgactattacctgatcttccgtgcagat
gatgaaggaatcataaatgaagaaaatacagataacaatgaagcaaatgtccgcattgaa
gtaagggacggcgctgatctgaccgtcagccatacagatattgtcaaagccaatgtaaca
ccaggaaaatccgtaaccctgtccgcaagagttaccaacagcggcggaacaggaaccctt
gcagcatcaaggcttggatattatctgtcacttgatgaagaatgggacagttcggatact
ctgctgggaacaaactattttggatcacttcttcctgcacagagtgaatcatttacacgg
acattcacaattcctgcaagcctgccttttggacatcattatatcattttttatgcagat
tatgataaaaatgtgagtgaaaccaatacggataacaaccgggtacctgtcagcatccaa
gtaaactattcaaaggaaatgacagtctttatacccaatgctcaaacatcatggtcagca
ggcagagatcagactattgaatggaccagcaatctcggcggaaccgttaaaattgaattg
tataaaagtctgacccgtaaaattgttatctcaaattccgcaccaaacaatggttctttt
atttggaaaatagcagcagacctgacaccggatactaattattggataaaaatcatcagc
aatgccgacacatccatatctgatgacagtgaacgatttgccattacatatccgcaaaca
ctgacattaatgactccgggcaacaacgacatctggggatatggtactacccggaatatc
acctggagcagcagctttaaaggcatagtggatattgatctttataaagccggttcattt
taccgcactgttgaccgtgctgttgaaacaaccagcgtatcagacaacacgtatgcctgg
attatcccgtctgatattcctgaaggagcagattaccagatcagcgtaacccattcatca
gaccggtcaacatttgacatgaatgatggatatttttcaattgccgacccgaatgcaaat
aatgatccggttgccatagatgattctgcaacaacagagcaggaaacagccgttataatc
tctgtgctggcaaacgataatcccattgatggcgaaaccctgaaaatttctgcaataacc
cagggtgaaaacggtacggttgttatcaatggagacaatacaataacctatactccggct
tcaggttttgcaggttctgattattttacatacactgttataagtaccggcaacggcgtt
aaaacagcaacagtttatattacagtttcagaaggcattgttatctgcgatacctgggaa
ctgcctccgggagcgggaactttggcaaaagatgaggctggcaatgtgtatgcagtcggc
ggattcagagacagcatcacactaggaaacgattctcctgtaacccttacggctgacggc
ttgtccgcaatatatattgcaaaatactccccgtccggcagcctgatatgggcacagaaa
gccacggcagaatatggtgaaattgcccccaatatcgcagtggataaaacaggtaatctc
tatatcagcggatattatcaatacaccatgaatatttacaatggagatgctgtttttaaa
accctcagcgaggaaggtattggcggatatgaagtttttattgccaaatacaatccgtta
ggccagccggtatgggctgaaatggcagggggacaatgggatgatttcggagagtccctg
atggtggacagcgcatccggttatctttacattggcgggagttttgacggcattctgaat
cttggaagcggagcgtctgctaccacgctgaattcggcagatgataatgttgatatgttc
cttgctaaatatacacttaatggaactctggtgtgggcaaaaaatgttgcaggaggaaca
gccagtattttctccattgcatcagatggagcagacggtgtgcttgcaacaggatattat
gaagaaaatgtaacattcagcggagcttcacctgttactcttaccggtacaagaagccgt
cagtttttcattgcagaattcagtgcggacaacggacaggcaaaatgggcacagaaagca
aacggatataacagtattggccgtgatgttgctgttgatgatactggtaatatttatgtt
acaggaacttttaaccagacctgtgatttttataacggcaatactgtatttaaaactctg
aacaattatcaggatagagatgaaatgttcatgattaaatacaatgcaaacggaactcct
gaatggataagacaggctggcggttcatcctatgacagtggagaggcaattacttttgat
ggaaacaaaaatcctgtgtttatcggctctttttatcaatatccggctgaatttacaaaa
gatgcatccggccagaccatagtgagcaatacctccggaattgcaacatatgatgcaaac
ggcaattttcagggatttatggaacccggaaccggaatgctaattgcagaaacatccggt
aatcctgctatcattggtaaagatggcgttgtcagcccatgcggaacaatttctgtcaat
aatccgcctgtggtagtagatgacacggcgaacacaattgaagaacagccagtaaccatt
aatgtcctggataatgactcagacccggatggcgataccctgagtgtaacaaatgttacc
cagggcgcaaacggcggagttatgattgatacaggcggattgaccgttacctacacgcca
aatgccggatttatgggaacagatacgtttgaatacacagtcagcgatggtaatggcggc
gtatcaactgcctcagtcagcattcttgtagaaagcggagcatcagccctgagtgtaaca
gatatacagccatccgatacaggcgcagtaactgtaaatcaggtcttcacatttacgctg
aatgagccggtaactgccggaacatgttacagcagcatcagccttgaagacagtaatgga
acctctgtttccatcaatactgtaatcaacggcaatggtctgacaattgaacctgctact
actctggcatcaggaatggattatatcctgaccatccctgtctgcgctctggaaggagca
accggaggcaatgctttgtctgaggatattttacatgcctttacaaccgaaagcggttca
acatccgttatattcacagacataacagccggaaatgatcatacagtggcattggacagt
gacgggaatgtatgggcatggggcggaaacaactacggacaggttggagacggaagtgtt
gaagacaggctcacaccggttcaggttcagggggtaagcaatattacggaaattgctgcg
ggtgcatggcacacgcttgctctggatatatacggctctgtatgggcctggggatataac
ccggatgggcagcttggcaacggaactcagattaactcatctgtaccggtaaacgtatcc
ggcctgaccgatataattgccattgcaaccggaaattctcattccattgccctgaaagga
gacggcacagtctggacatggggtaaaaacagttcatatcaactggggcacggtcttggt
gatacaacagatgagcttattcctggtcaggtgccgaatctgttcaatgtcattgatatt
gcaggcggatataacttcaccactgtgctgaagcaggatcgtacagtctggtcatggggc
agaaatgacagaggccaactgggtaccggcgatattatagatcgaaaagttccggctcag
gcccttctggctgcaaatgcggattcaatttacggcactttgggaacccgtgcctttgcc
atcatgacagacggaacagtttggggatggggatataacggtatgaacggtgctgttgga
aacggcagcggatgggatcagccttttcctgtgaaagttcttgataacgcaactgatctc
tcaggcggtgaatggcataccattgcgcttacatcagacggaactattaaggcatgggga
cgaaacgatgaaggcgaatacggaaatggaaccacaaattacagttcaactcctgttccg
ggagcagatatttcaaatgttataaatattgaagctggccgagttttcaccgtagctttg
aaagaaaacggcacaatctggtgctggggatataacggtaaaggccaacttggaaacaat
acaaccgaaaacgctctgattcctgttcaggtaataataaagtaa
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