Desulfonema limicola: dnl_12190
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Entry
dnl_12190 CDS
T07101
Symbol
recN
Name
(GenBank) DNA repair protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dli03400
]
dnl_12190 (recN)
DNA repair and recombination proteins [BR:
dli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
dnl_12190 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
dnl_12190 (recN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_22
AAA_29
RsgA_GTPase
DUF5595
AAA_27
DUF1664
Motif
Other DBs
NCBI-ProteinID:
QTA78972
UniProt:
A0A975GF76
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All DBs
Position
1346499..1348196
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AA seq
565 aa
AA seq
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MLQDLSIKNFAIIDDLQISFPKGFSILSGETGAGKSIIINAVNLLLGSRVTSGFIRTGAE
TAELEAFFNISPDSRAALILKENDIDPSEGLLVRRIIAQNNRHKIYINNRLSTSTLLNAV
TADMASISGQRAHQGLLDENQHLLILDQFGKLMPLREKTGRIYQDIQPLIQKLNRLNNAK
ERQAEQIELLEFQKNEILEADIKEKEDAELEKELVLLKNGETLYTAVHSGLEELYNAQNA
IVERLTEVKKRLEKACQIDPELDPQVEGLADTTFRIEDIADNLRAYLGNIQIDEKRLAVI
ADRLHDLQKLKRKYGGSLEAVNAHLKSIKKQLAGFENISDEIAQTEEKLAEQCRKLAEIA
VQLSEKRRQTGIRLAKKVEKELEDVKMSNTRFEVSLKQIPASESASPFLVVNGGSISETG
IDRASFIIAPNIGEDLKPLTAIASGGELSRVVLALKVILAETESVETIIFDEVDAGIGGS
VAEVVGQKIAGLGAFHQVLCITHLAQIAKFGHTHFRISKQVVNGRTITSITQLDREARIK
EIARMLGGVKMTQATLDHASEMLFE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagacctttctataaaaaattttgccattattgatgatcttcaaatcagtttt
cccaaaggttttagtattttaagcggtgaaaccggggctgggaaatccattattattaat
gctgttaatctcctgcttggaagcagggtaacatcaggttttattcgtacaggagcagaa
acagcagaactggaagctttttttaacatcagccctgacagcagggcagcccttatttta
aaagaaaatgatattgatccatctgaaggattattagtcagaaggattatagctcaaaat
aaccgccataaaatttatataaacaaccggctttccaccagcacccttcttaatgcagtt
actgcagatatggcaagcatttcaggacagcgggcacaccaggggcttttagatgaaaat
cagcaccttcttattttagaccagtttggcaaactcatgcctctcagggaaaaaacaggc
agaatttatcaagatatccagcctttaattcaaaagctcaacaggctcaacaatgcaaaa
gagcgtcaggctgaacagattgaactgcttgaatttcaaaaaaatgaaatcctggaagca
gatataaaagaaaaagaagatgcagaacttgaaaaggaactggtactcctgaaaaacggt
gaaacactttatactgctgttcacagcgggcttgaggagctttacaatgcccaaaatgcc
atagtagaaaggcttaccgaggtaaaaaaacgcctggaaaaagcctgccagatagaccct
gaacttgatccccaggtagaagggcttgctgatacaacattccgcatagaagatattgca
gacaatctgagagcttacctgggcaatatccagatagatgaaaaacgcctggctgtcata
gccgacagactccatgacctgcaaaagcttaaacgcaaatacgggggttctcttgaagct
gttaatgcacacttgaaatccatcaaaaaacagcttgcaggttttgaaaatatatctgat
gaaattgcacaaacagaagaaaaactggctgaacaatgcaggaaactggctgaaattgct
gtccagctttcggaaaaacgcaggcagacaggtatcaggcttgctaaaaaggttgaaaaa
gagcttgaggatgtaaaaatgtcaaataccaggtttgaagtttctttaaagcagatacct
gcctcagaatctgccagcccttttcttgttgtaaatggaggcagtataagtgaaaccggt
attgacagggcatcatttataattgcgcccaatattggcgaagatttaaaacccctgaca
gccattgcctcaggaggcgagctttcccgtgtagtgcttgctttaaaggttatcctggca
gaaaccgaatctgtggaaacaattatctttgacgaggttgatgcaggaatcggcggaagc
gtagctgaggttgtaggtcagaagattgcaggcctgggagcctttcaccaggtactctgc
attactcatcttgcccagattgcaaaattcgggcacactcattttagaatttccaaacag
gttgtaaacggcagaaccattacaagcataacacagcttgacagggaagccaggattaaa
gagattgccaggatgctgggaggggttaaaatgacccaggcaaccctggatcatgcttct
gaaatgctttttgaatga
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