Desulfonema limicola: dnl_13580
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Entry
dnl_13580 CDS
T07101
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dli
Desulfonema limicola
Pathway
dli00061
Fatty acid biosynthesis
dli00071
Fatty acid degradation
dli01100
Metabolic pathways
dli01212
Fatty acid metabolism
dli02024
Quorum sensing
dli04146
Peroxisome
Module
dli_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
dnl_13580
00071 Fatty acid degradation
dnl_13580
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
dnl_13580
09145 Cellular community - prokaryotes
02024 Quorum sensing
dnl_13580
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dli01004
]
dnl_13580
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dli04147
]
dnl_13580
Enzymes [BR:
dli01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
dnl_13580
Lipid biosynthesis proteins [BR:
dli01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
dnl_13580
Exosome [BR:
dli04147
]
Exosomal proteins
Exosomal proteins of breast milk
dnl_13580
Exosomal proteins of breast cancer cells
dnl_13580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
RND-MFP_C
Motif
Other DBs
NCBI-ProteinID:
QTA79105
UniProt:
A0A975B5D8
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All DBs
Position
1483764..1485302
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AA seq
512 aa
AA seq
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MSYLIHHFLEKSSDLNPGKEAVIHGNNRYTYQEIEAKANQTANWLLQSGIKKGDRVAILL
RNSVEYIYSYYGVLKTGAIAVPFNTGLEGLELGEMLKDCSAKVLISETYFSKLIINICKS
ISCLNLIAFSDKKINIDDNKIKCIQFSDIYPEFSSNRPHIPCIDQDISSIIYTSGSTGKP
KGVMLSHLNIVSNTRSIVSYLHLTEKDKCMVILPFYYVYGKSLLNTHFKVSGTIIIDNRF
TFPNAVLKNMIEEKATGFAGVPSTYSILVNRSSMAKMNFPSLRYITQAGGHMPVQVRQQL
LEIFPDKQIFIMYGATEASARLAYLEPDQLGQKIKSFGRAIPNVEIRIVDENSEEVPPDY
EGEITARGSNIMTGYWNAPGETSKVLKNGWYYTGDLGIRDKDGFLYITGRKKDMIKSGIY
KISANEIEEVLYKYPGIHEAAVIGLPDDILGESINAAVVPKPGNTLEPDEIMKFCNERLP
SYKVPKTIKISKNLPKNEAGKVLKKQIKEIFK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacctgattcatcattttttagaaaaaagttcagacttaaatcctggaaaagaa
gctgttatccatggaaataacagatatacataccaggaaattgaagcaaaagccaaccag
actgcaaactggctgctgcagtcagggattaaaaaaggagaccgggttgcaattcttctc
agaaattcagttgaatacatatattcatattatggagtgctaaaaaccggtgcaatcgcc
gtaccttttaacacagggcttgagggcctggaactaggggaaatgttaaaagactgcagt
gccaaagttctgatttccgaaacttatttttcaaaacttattataaatatatgcaaaagc
atttcatgtttaaacctgatagcattttcagacaaaaaaattaatattgatgacaataag
atcaaatgtattcaattttctgatatataccctgaattttcctcaaacaggccgcacatt
ccctgcatagaccaggatatttcatcaatcatatatacttcaggcagtacaggaaaaccc
aaaggagtaatgctgagtcatctaaatattgtttcaaacaccagatccattgtctcctat
cttcatctcacagaaaaagacaaatgtatggtaatactgcctttttattatgtttatgga
aaatcacttttaaatacccatttcaaggtttcaggaacaattattattgacaaccgtttc
acattccccaatgcagtattaaaaaacatgatagaagaaaaagccacaggttttgcaggg
gttccttcaacctactccatcctggtaaaccggtcttcaatggcaaaaatgaactttccc
agcctgagatacatcacccaggcaggcggacatatgccagtccaggtaaggcagcagctt
ttggaaatatttccagacaaacagatatttataatgtacggtgcaacagaggcttcagca
aggcttgcatatcttgaaccagatcaactgggacagaaaataaaatcctttggcagggca
attccaaatgtggaaataagaatagtagatgagaatagtgaagaagtgcctcctgattat
gaaggtgaaattactgcaagaggttccaatatcatgacaggctactggaatgctcctggg
gaaacatcaaaggttctaaaaaacggctggtattataccggagatttgggaatccgtgat
aaagacggttttttatacataaccggacgaaaaaaagatatgataaaatcaggcatttat
aaaataagtgccaatgaaatagaagaagttttatacaaataccctggaatacatgaggct
gctgttatagggctgccggatgatattcttggtgaatcaataaatgcagcagttgtcccc
aaacctggaaatactttggaacctgatgaaataatgaaattctgcaatgaacgactgcca
tcttacaaggttccaaaaactatcaaaatatctaaaaacttacccaaaaatgaagccggc
aaggttttaaaaaaacaaattaaggagatttttaaatga
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